Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq161514 122 1e-22 seq571 104 3e-17 seq177628 96.9 4e-15 seq173114 95.1 1e-14 >seq161514 Length=192 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 || ||||| ||| |||||| || |||||||| || ||| |||||||| || |||||| Sbjct 16 CCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGCATGAGTCCGCGCTTC 75 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 |||| ||||||||| | ||||||||| ||||||||||| ||||| || |||||| Sbjct 76 TTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCCTCGACCGCGGCGAAC 135 Query 126185 GCAAAGAGACGCTCAGCAAAGG 126206 || | ||||||||| |||||| Sbjct 136 GCGACGAGACGCTCGCCAAAGG 157 >seq571 Length=811 Score = 104 bits (114), Expect = 3e-17 Identities = 137/186 (74%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 126100 CAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAA 126159 || ||||||||| |||||||| ||||| | |||||| | ||| || || || ||||| Sbjct 5 CAATCCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAA 64 Query 126160 GAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTG 126218 |||||| |||||||| |||||| || | ||| ||||| || |||| ||| | | | Sbjct 65 GAAGATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTC 124 Query 126219 TGTCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCG 126278 || | |||||||| |||||||| ||||| ||| || ||| || ||||| || || Sbjct 125 GGT-GATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCG 183 Query 126279 C-TTCA 126283 | |||| Sbjct 184 CGTTCA 189 >seq177628 Length=4820 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||| ||| |||||| ||||||||||| || ||| Sbjct 2981 GCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAATCCC 3040 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| || |||||||| || | ||||||||| | |||||| || || ||||| || Sbjct 3041 GGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAATATA 3100 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-AA 126225 || || || |||||| || | | ||||| ||||||| | | ||||| | | Sbjct 3101 CCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAGGTG-GAACGTTTGTCCGAGAT 3159 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 |||||| | ||||| | || || || |||||| |||| |||| | || || || Sbjct 3160 CCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGATCGTCTCCACGGCATCGAA 3219 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 || | || | ||| | ||||| || ||| | || ||||| Sbjct 3220 CAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGATGAG 3264 >seq173114 Length=471 Score = 95.1 bits (104), Expect = 1e-14 Identities = 261/395 (66%), Gaps = 4/395 (1%) Strand=Plus/Plus Query 113944 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGC 114003 ||| ||| | || || ||||| ||||| || ||||| |||||||||||| || || || Sbjct 1 GATGTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGC 60 Query 114004 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTT 114063 |||||||| || || | | | ||| || || ||| | | ||| |||| Sbjct 61 AGTGGGCATCGGCGCTGTCACTAACGAGTTGCGCAGCCCCGTCTTGACAATCTTGGCCTT 120 Query 114064 GAGGGCGTCCCAGTCGTA-GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 114122 ||| || |||||||| | |||||| || | | | ||||||||| ||||||| Sbjct 121 GAGCGCATCCCAGTCCCACAGTGAGCTCGGTGTGACAC-CCCACATATCGTACTGGAGCT 179 Query 114123 TACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT 114182 || | || || || || || || |||||||| || ||||| |||||||| | Sbjct 180 GCCCGCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCATCT 239 Query 114183 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 114242 | | || |||||||| || || || || || |||||||| || | ||| | | | Sbjct 240 CTGCACTGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGAGCTCTT 299 Query 114243 TGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAAT-AAATACATCCGCGAGACCTTGG 114301 |||| || ||| ||||| | || | ||| | | | || || || || || || Sbjct 300 TGGCTGCGGGGGAGTCAAATGGAAGAC-GCAGACACTGGAAGGTGTCTGCAAGTCCCTGC 358 Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 114336 ||||||| || || ||||| || | ||| || || Sbjct 359 ACACCGACTCCGATAGGGCGGTGACGCATGTTTGA 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595994381618560