Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq161514 122 1e-22
seq571 104 3e-17
seq177628 96.9 4e-15
seq173114 95.1 1e-14
>seq161514
Length=192
Score = 122 bits (134), Expect = 1e-22
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124
|| ||||| ||| |||||| || |||||||| || ||| |||||||| || ||||||
Sbjct 16 CCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGCATGAGTCCGCGCTTC 75
Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184
|||| ||||||||| | ||||||||| ||||||||||| ||||| || ||||||
Sbjct 76 TTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCCTCGACCGCGGCGAAC 135
Query 126185 GCAAAGAGACGCTCAGCAAAGG 126206
|| | ||||||||| ||||||
Sbjct 136 GCGACGAGACGCTCGCCAAAGG 157
>seq571
Length=811
Score = 104 bits (114), Expect = 3e-17
Identities = 137/186 (74%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 126100 CAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAA 126159
|| ||||||||| |||||||| ||||| | |||||| | ||| || || || |||||
Sbjct 5 CAATCCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAA 64
Query 126160 GAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTG 126218
|||||| |||||||| |||||| || | ||| ||||| || |||| ||| | | |
Sbjct 65 GAAGATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTC 124
Query 126219 TGTCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCG 126278
|| | |||||||| |||||||| ||||| ||| || ||| || ||||| || ||
Sbjct 125 GGT-GATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCG 183
Query 126279 C-TTCA 126283
| ||||
Sbjct 184 CGTTCA 189
>seq177628
Length=4820
Score = 96.9 bits (106), Expect = 4e-15
Identities = 194/285 (68%), Gaps = 2/285 (1%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| | |||||||| ||| |||||| ||||||||||| || |||
Sbjct 2981 GCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAATCCC 3040
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||| || |||||||| || | ||||||||| | |||||| || || ||||| ||
Sbjct 3041 GGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAATATA 3100
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-AA 126225
|| || || |||||| || | | ||||| ||||||| | | ||||| | |
Sbjct 3101 CCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAGGTG-GAACGTTTGTCCGAGAT 3159
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285
|||||| | ||||| | || || || |||||| |||| |||| | || || ||
Sbjct 3160 CCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGATCGTCTCCACGGCATCGAA 3219
Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330
|| | || | ||| | ||||| || ||| | || |||||
Sbjct 3220 CAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGATGAG 3264
>seq173114
Length=471
Score = 95.1 bits (104), Expect = 1e-14
Identities = 261/395 (66%), Gaps = 4/395 (1%)
Strand=Plus/Plus
Query 113944 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGC 114003
||| ||| | || || ||||| ||||| || ||||| |||||||||||| || || ||
Sbjct 1 GATGTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGC 60
Query 114004 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTT 114063
|||||||| || || | | | ||| || || ||| | | ||| ||||
Sbjct 61 AGTGGGCATCGGCGCTGTCACTAACGAGTTGCGCAGCCCCGTCTTGACAATCTTGGCCTT 120
Query 114064 GAGGGCGTCCCAGTCGTA-GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 114122
||| || |||||||| | |||||| || | | | ||||||||| |||||||
Sbjct 121 GAGCGCATCCCAGTCCCACAGTGAGCTCGGTGTGACAC-CCCACATATCGTACTGGAGCT 179
Query 114123 TACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT 114182
|| | || || || || || || |||||||| || ||||| |||||||| |
Sbjct 180 GCCCGCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCATCT 239
Query 114183 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 114242
| | || |||||||| || || || || || |||||||| || | ||| | | |
Sbjct 240 CTGCACTGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGAGCTCTT 299
Query 114243 TGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAAT-AAATACATCCGCGAGACCTTGG 114301
|||| || ||| ||||| | || | ||| | | | || || || || || ||
Sbjct 300 TGGCTGCGGGGGAGTCAAATGGAAGAC-GCAGACACTGGAAGGTGTCTGCAAGTCCCTGC 358
Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 114336
||||||| || || ||||| || | ||| || ||
Sbjct 359 ACACCGACTCCGATAGGGCGGTGACGCATGTTTGA 393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595994381618560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |