Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq180125 100 3e-16
seq177628 89.7 5e-13
>seq180125
Length=1791
Score = 100 bits (110), Expect = 3e-16
Identities = 135/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 52649 CGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTT 52708
|||||||||||| | ||| | ||||||||||| | ||||||| |||||||||||||
Sbjct 1608 CGCGCTGCCGGTTGGGCTCATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTT 1549
Query 52709 TGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAGTACTTCAACGCTCGCAATC 52767
||| || || || || | || ||||| | | ||||| || ||| | |||| |
Sbjct 1548 TGTCGCTGACCGCCTCCTAGTCGCTCTCGGCAACGATAAAGT-CTACAATTC-GGCAAAC 1491
Query 52768 CGTTT-GAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGA 52826
| ||| || || ||| | | ||||| || | |||||||| |||||||||||||||||
Sbjct 1490 CCTTTCGATTTCATGGATATGATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGC 1431
Query 52827 GTC 52829
|||
Sbjct 1430 GTC 1428
>seq177628
Length=4820
Score = 89.7 bits (98), Expect = 5e-13
Identities = 130/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 52649 CGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTT 52708
||| || || ||||| || | |||||||| || | |||||| ||||||| || ||
Sbjct 2827 CGCACTTCCCGTCGACCTCATTGGCATGAATGCCAAACTGATGTGCCAGTACATTGAATT 2768
Query 52709 TGTGGCGGATCGTCTGTTGGT-GCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATC 52767
|||||||||||| || | || ||| || ||| | |||| | | |||| |||||
Sbjct 2767 TGTGGCGGATCGCCTTCTCGTCGCA-CTTGGGAACGAAAAGGTGTACCACGCATCCAATC 2709
Query 52768 CGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAG 52827
| || || || ||| ||| || ||||| | || || ||||||||||| |||||||| |
Sbjct 2708 CTTTCGACTTCATGGACATGATCTCGCTGCAAGGGAAAACCAACTTTTTTGAGAAGCGGG 2649
Query 52828 T 52828
|
Sbjct 2648 T 2648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495133204535040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |