Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq161514 113 6e-20 seq173114 107 2e-18 seq177628 105 8e-18 seq571 93.3 5e-14 >seq161514 Length=192 Score = 113 bits (124), Expect = 6e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 || ||||| ||| |||||| || |||||||| || || |||||||| || |||||| Sbjct 16 CCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGCATGAGTCCGCGCTTC 75 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 |||| ||||||||| | |||||| || ||||||||||| ||||| || |||||| Sbjct 76 TTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCCTCGACCGCGGCGAAC 135 Query 127658 GCAAATAGACGCTCGGCAAAGG 127679 || | ||||||||| |||||| Sbjct 136 GCGACGAGACGCTCGCCAAAGG 157 >seq173114 Length=471 Score = 107 bits (118), Expect = 2e-18 Identities = 264/395 (67%), Gaps = 4/395 (1%) Strand=Plus/Plus Query 115905 GATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGC 115964 ||||||| | || || ||||| ||||| || ||||| |||||||||||| || || || Sbjct 1 GATGTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGC 60 Query 115965 TGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTT 116024 |||||||| || || | | | |||||| || ||| | ||| |||| Sbjct 61 AGTGGGCATCGGCGCTGTCACTAACGAGTTGCGCAGCCCCGTCTTGACAATCTTGGCCTT 120 Query 116025 GAGGGCGTCCCAGTCGTA-GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGA 116083 ||| || |||||||| | |||||| || | | | |||||||||| ||||||| Sbjct 121 GAGCGCATCCCAGTCCCACAGTGAGCTCGGTGTGACAC-CCCACATATCGTACTGGAGCT 179 Query 116084 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 116143 || | ||||| || || || || ||||| || || ||||| |||||||| | Sbjct 180 GCCCGCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCATCT 239 Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203 | | || |||||||| || || || || || |||||||| || | ||| | | | Sbjct 240 CTGCACTGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGAGCTCTT 299 Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAAT-AAATACATCCGCGAGACCTTGG 116262 |||| || ||| ||||| | |||| ||| | | | || || || || || || Sbjct 300 TGGCTGCGGGGGAGTCAAATGGAAGAC-GCAGACACTGGAAGGTGTCTGCAAGTCCCTGC 358 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297 ||||||| || || ||||| || | ||| || || Sbjct 359 ACACCGACTCCGATAGGGCGGTGACGCATGTTTGA 393 >seq177628 Length=4820 Score = 105 bits (116), Expect = 8e-18 Identities = 197/286 (69%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| ||| |||||| ||||||||||| || || Sbjct 2981 GCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAATCCC 3040 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || |||||||| || | ||||||||| | |||||| || || ||||| || Sbjct 3041 GGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAATATA 3100 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGAC-TTTGTATCA-A 127697 || || || |||||| || | | |||||||||||| | || || ||||| | | Sbjct 3101 CCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAG--GTGGAACGTTTGTCCGAGA 3158 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 |||||| | ||||| | || || || ||||||||||| |||| | || || | Sbjct 3159 TCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGATCGTCTCCACGGCATCGA 3218 Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 127803 | || | || | ||| | ||||| || ||| | || ||||| Sbjct 3219 ACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGATGAG 3264 >seq571 Length=811 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 127577 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 127636 |||||||| |||||||| ||||| | |||||| | ||| || ||||| ||||||||| Sbjct 9 CCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAAGAAG 68 Query 127637 ATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATC 127695 || |||||||| |||||| || | || ||||| || |||| ||| | | | | Sbjct 69 ATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTCGGT- 127 Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TT 127754 | |||||||| |||||||| ||||| ||| || || || ||||| || ||| || Sbjct 128 GATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCGCGTT 187 Query 127755 CA 127756 || Sbjct 188 CA 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612111225717120