Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq179421 100 7e-16 seq179755 84.2 5e-11 seq171348 84.2 5e-11 >seq179421 Length=8220 Score = 100 bits (110), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || ||||||||||| |||| ||||||||| || || Sbjct 1497 CGCAGACGCAGAACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTG 1556 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || || |||||||| |||||||||||||| |||||||||||||| Sbjct 1557 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGG 1606 >seq179755 Length=18176 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||||||||| ||||| |||| ||||||||| | || | || ||| Sbjct 9495 AGCACCAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGCCCGTCT 9554 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| | ||||||||||| || Sbjct 9555 TCAAGCTGCTTGCCAGCGAAGATCAACCGCTGCTGGTCGGG 9595 >seq171348 Length=246 Score = 84.2 bits (92), Expect = 5e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| |||| ||||||||| | | || | ||||| |||||||||||||||||||| Sbjct 246 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTTCCGGCGAA 187 Query 199498 GATGAGACGCTGCTGGTCCGG 199518 ||| |||||||| ||||| || Sbjct 186 GATAAGACGCTGTTGGTCGGG 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176172018836144