Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq179421 91.5 2e-13 seq179755 89.7 6e-13 seq171348 82.4 9e-11 >seq179421 Length=8220 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||||| || || |||| || |||||| ||||| ||||||||| Sbjct 1491 CCTCCACGCAGACGCAGAACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1550 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || ||||| |||| |||||||||||||||||||| || | |||||||||||| Sbjct 1551 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTC 1603 >seq179755 Length=18176 Score = 89.7 bits (98), Expect = 6e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||| || |||||| |||| || ||||||||||| ||||| Sbjct 9516 TCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGCCCGTCTTCAAGCTGCTTGCCAGCGAAG 9575 Query 46463 ATCAAGCGCTGCTGGTCGG 46481 ||||| ||||||||||||| Sbjct 9576 ATCAACCGCTGCTGGTCGG 9594 >seq171348 Length=246 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || || |||||||| |||||||| Sbjct 246 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTTCCGGCGAA 187 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491 || | ||||| ||||||| ||| | ||| Sbjct 186 GATAAGACGCTGTTGGTCGGGCGGGATGCT 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563952256544640