Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq571 298 5e-76 seq177628 269 3e-67 seq179755 107 2e-18 seq179421 98.7 1e-15 seq32941 84.2 2e-11 seq171348 82.4 8e-11 >seq571 Length=811 Score = 298 bits (330), Expect = 5e-76 Identities = 370/504 (73%), Gaps = 7/504 (1%) Strand=Plus/Plus Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 ||||| || ||||| || || ||||| |||||||| || | ||| |||||| ||| || Sbjct 3 GTCAATCCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAG 62 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| ||||| || |||||||||||||| |||||||| | || ||||| | | Sbjct 63 AAGAAGATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCG 122 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128 || |||||| || |||||| |||||||| | |||||||| || || |||| Sbjct 123 TCGGTGATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACC 182 Query 133129 GCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCG 133186 ||||||| ||| ||| ||||||| | |||| | | ||||| |||||||| || | Sbjct 183 GCGTTCAGCAAGCGGTGTTTCTC--CACAGGATCCCTGACGTAAGTGTCGATTAGCAGGG 240 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 | || |||| ||||| ||||||||||| || || || ||||| ||||| || |||| Sbjct 241 AGTAAGTTTCGGAGTGAACGTTCTCCATCATAATCTGGAATCCGTAGAAGCAGCGAGCCT 300 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | | ||||||||| | ||||| || | || || ||||||||||||||||| || Sbjct 301 CAGCGCACTGCACTTCATTGGCGAACCGTGCTACAAGGTTTTCGTTGACGATGCCATCCG 360 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGC 133363 |||||||||||| || || ||||| ||||||| ||||||| | ||| ||| | Sbjct 361 AGGCGGCGAAAAAAGCGAGGACGTGTGAGATGAAAAGGCGCTCATCATCGCTCAGCTTGT 420 Query 133364 GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 | ||||||||| ||||||| ||||||||| | |||||| | ||||| || ||||| | Sbjct 421 CCCTCCAGTCGCGAGTGTCCTGGGACAGGTCGATTTCCTCGGCAGTCCAGAAAGACGCTT 480 Query 133424 CGGCTTTTTTGTACATACTCCACA 133447 || | ||||||| | ||||| Sbjct 481 GTGCCTGCTTGTACAGAGCCCACA 504 >seq177628 Length=4820 Score = 269 bits (298), Expect = 3e-67 Identities = 415/584 (71%), Gaps = 15/584 (3%) Strand=Plus/Plus Query 132865 GGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCC 132924 ||||| || || ||| |||| | |||||| ||||| ||| |||| ||||||||| Sbjct 2948 GGCCGGCGCTTCAGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCG 3007 Query 132925 CTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAA 132984 | | ||||| || || ||| ||||| || ||||| || || || ||||||| ||| Sbjct 3008 CGGCTGATGAGCTCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAG 3067 Query 132985 AATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGG 133044 || |||| ||| || || |||||||| | || || ||||||||||||||||||| | Sbjct 3068 AAAATGGAGGCAAATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAG 3127 Query 133045 CGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCT 133104 |||||| | || |||| |||| | |||||| || ||||| || || || Sbjct 3128 CGCTCGGCAAAGGTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGC 3187 Query 133105 TTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTC-TTCCG-AGGA-- 133160 |||| || || ||||| || | || || | ||| || || | ||| | |||| Sbjct 3188 TTGATACATGGGATCGTCTCCACGG----CATCGAACAGATACTCCCGTTCAGCAGGATC 3243 Query 133161 ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGAT 133220 ||| | || |||||||||||| ||| ||| | || ||||| | ||| ||||| ||| Sbjct 3244 ACGAATATACGTGTCGATGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGAT 3303 Query 133221 TTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTT--CTTGAGCGAAACGCTCG 133278 |||||| || || ||||| || || || | |||| |||| ||||| ||||||||| Sbjct 3304 TTGAAAACCATAGAAGCAGCGGGCTTCTGCGGCCTGAACTTCGCTTGA--GAAACGCTCC 3361 Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 | || || ||||||||||||||||| ||||||||| ||||||| || || || Sbjct 3362 AGGAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATA 3421 Query 133339 AAATGGCGCTCGTTGTCGTTCAAG-CGCT--CCCAGTCGCGCGTGTCCTTGGACAGGTCC 133395 |||||||| |||||| |||| | | ||| ||||||| | ||| | ||| ||||| Sbjct 3422 AAATGGCGTTCGTTGGCGTTGAGGTTGCTTGTCCAGTCGAGAACGTCGTGGGAGAGGTCT 3481 Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | |||||| | ||||| || | |||| ||| ||||||||||| Sbjct 3482 ATCTCCTCTGCAGTCCAGAAGCAGGCCTGGGCCTTTTTGTACAT 3525 Score = 187 bits (206), Expect = 2e-42 Identities = 207/276 (75%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| | || || | || ||||| | |||||||| || || || Sbjct 4787 GTATGTGTCGATCAACAGAGAGTATGTCTCGGAGTGAATATTCTCCATCATAATCTGGAA 4728 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| | ||||||||||| | | ||||||||||| ||| || Sbjct 4727 GCCGTAGAAGCAACGAGCCTCGGCGACCTGCACTTCGTTCGAGAAACGCTCGAGCAGGTT 4668 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| ||||||||| || ||||||||||| || || || |||||| || || Sbjct 4667 CTCGTTGACAATGCCGTCGGACGCAGCGAAAAAGGCGAGGACATGRGAGATGAAGTGSCG 4608 Query 133347 CTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| | |||| | | | ||||||| || ||||||| |||||||||| |||||| Sbjct 4607 CTCGTCGGCGTTGAGCTTGTTGTTCCAGTCGTGCATGTCCTTCGACAGGTCCATCTCCTC 4548 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || || ||||| || || ||||| Sbjct 4547 GGCGGTCCAGAAGGAAGCTTCGGCCTTCTTATACAT 4512 >seq179755 Length=18176 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| ||||||| |||||| | || | ||| ||||| ||||| || |||| |||||| Sbjct 9601 ATCCCCCCCGACCAGCAGCGGTTGATCTTCGCTGGCAAGCAGCTTGAAGACGGGCGCACG 9542 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGC 38468 |||| ||||||||||||||| |||||| |||| || || ||||||| ||| || | || Sbjct 9541 CTCAGCGACTACAACATCCAGAAGGAATCGACTCTCCACCTGGTGCTCCGTCTGCGTGGT 9482 Query 38469 GG 38470 || Sbjct 9481 GG 9480 >seq179421 Length=8220 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| | ||||| ||||| ||||| | ||| ||||| ||||| || |||| ||||| Sbjct 1612 ATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACG 1553 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGC 38468 || | ||||||||||||||| ||||| |||||||||| | || |||||| || | || Sbjct 1552 CTGAGCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGTTCTGCGTCTGCGTGGA 1493 Query 38469 GG 38470 || Sbjct 1492 GG 1491 >seq32941 Length=300 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATT 133194 ||| |||||||||| || || ||| | ||| || ||||||||| || || | Sbjct 296 CAAGCGGAGTTTCTGAGACG--GATCGCGGATGTACGTATCGATGAGGAGAGAGTAGGTC 239 Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254 |||||||| | ||| ||||| ||||||||| | ||||| || || || | | Sbjct 238 TCCGAGTGGATGTTTTCCATCATCGCTTGAAAGCCAAAGAAGCAGCGAGCTTCCGCACAC 179 Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314 || ||||| | || || | | | || | ||| |||||||||||||||||| ||| || Sbjct 178 TGTACTTCATTCGCAAACCTCGCCACTAAATTCTCGTTGACGATGCCGTCGGAGGCTGCA 119 Query 133315 AAAAAGGCCAGCAC 133328 || |||||||| || Sbjct 118 AAGAAGGCCAGGAC 105 >seq171348 Length=246 Score = 82.4 bits (90), Expect = 8e-11 Identities = 70/85 (82%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| ||||||||||| || || | ||| || || |||||||| || | ||||||| Sbjct 161 TCCCGCCCGACCAACAGCGTCTTATCTTCGCCGGAAAGCAGCTGGAGGATGGTCGCACCC 220 Query 38410 TCAACGACTACAACATCCAAAAGGA 38434 || ||||||||||||||| ||||| Sbjct 221 TCTCCGACTACAACATCCAGAAGGA 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499034706810880