Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq181131 181 1e-40
seq178742 113 6e-20
seq174077 87.8 2e-12
seq181855 84.2 3e-11
>seq181131
Length=2697
Score = 181 bits (200), Expect = 1e-40
Identities = 252/353 (71%), Gaps = 0/353 (0%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||||||||| || || || ||||| || ||||| || ||||||||
Sbjct 1762 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACCTCGAAGATACCC 1703
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | || ||||| || || || || || || || || ||||| |||
Sbjct 1702 TCCTCGATGGTCAGGAGGGACACATCGAAGGTTCCTCCTCCGAGATCGAAGATGAGGACG 1643
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| || | ||||| ||||||||||| ||||| || || || || || ||
Sbjct 1642 TTGCGCTCGCCGACGACCTTCTTGTCGAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCG 1583
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || || ||||| ||||| || ||| | || || || || || || ||
Sbjct 1582 TTGATGATCCGGAGGACGTTCATGCCAGAGATGGTTCCGGCGTCCTTGGTGGCCTGACGC 1523
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| ||||| || ||||| |||| ||| | | |||||
Sbjct 1522 TGGGAGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTTGTTGATAGTGGTGCCGAGG 1463
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
||||| || ||| | || ||||| ||| ||| ||||| || || ||||| ||
Sbjct 1462 TACGACTCTGCGGTCTCCTTCATCTTGAGAAGGACCATGGAGGAGATCTCCTC 1410
Score = 105 bits (116), Expect = 8e-18
Identities = 115/152 (76%), Gaps = 3/152 (2%)
Strand=Plus/Minus
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| |||||||||| || ||| || || || || || ||||||||||| || ||
Sbjct 1147 GTGTTAATGGGGTTCATTGCGACTTGATTTTTTGCGGCATCGCCGATAAGACGCTCGTTG 1088
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| | | |||| |||||| || ||||| || || || || |||||||| || || ||
Sbjct 1087 T---CGGAGAACGAGACGTAGGAGGGGGTGGTGCGGTTACCCTGGTCGTTGGCGATGATC 1031
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
|| || || |||||||||||||| ||||||||
Sbjct 1030 TCAACACGATCGTTTTGCCAGACACCGACGCA 999
>seq178742
Length=39985
Score = 113 bits (124), Expect = 6e-20
Identities = 187/268 (70%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || || ||||| | ||||| || || ||||| || ||||| | || | |||
Sbjct 23115 TCAAAGTCCTCTCCACCAAGATGTGTGTCACCGGCGGTGGCCTTGACAGCGAAAACACCA 23174
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| ||| || | | |||||||| || || || ||||| || || |||||||| |||
Sbjct 23175 CCGCTAATATTCAGAAGGGAAACATCGAAAGTTCCTCCACCAAGATCGAAAATGAGGACG 23234
Query 7577 TTCGTATCGTCGTCTTTGTT--CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| | ||| | ||||| | | || |||||||| || || || || || || || |
Sbjct 23235 TTTTTTTCGGC--CTTTGATTGCCGGTCAAGACCGTAGGCAATGGCGGCGGCGGTGGGCT 23292
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || || ||||| ||| | || || || || | | |||||||| || || | |
Sbjct 23293 CGTTGATGATACGCAGAACATCGAGACCGGCGATGGCACCAGCATCTTTAGTGGCCAGAC 23352
Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722
| ||||||||||| |||||||| |||||
Sbjct 23353 GCTGCGAATCGTTGAAGTAGGCGGGGAC 23380
>seq174077
Length=14717
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 7593 TGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGAC 7652
||| ||| ||||| ||||| |||| |||||| ||||| ||||| || || | || |||
Sbjct 12178 TGTCCTTGTCGAGTCCGTATGCGAGAGCCGCTGCCGTAGGTTCGTTGATCACCCGGAGAA 12237
Query 7653 AGTTCAGGCCAGCAATAGTTGCC--GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710
|| || |||||||| |||| || || || || ||||||||||| | ||||| ||
Sbjct 12238 CGTCAAGACCAGCAATC--TGCCCGGCGTCCTTGGTGGCTTGTCGTTGTGCGTCGTTGAA 12295
Query 7711 GTAGGCCGGGACCGTTACGACCGC 7734
||| || ||||| || | ||| ||
Sbjct 12296 GTATGCAGGGACGGTGATGACAGC 12319
>seq181855
Length=50147
Score = 84.2 bits (92), Expect = 3e-11
Identities = 174/259 (67%), Gaps = 9/259 (3%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||||||||| |||||||| || || || ||||| || ||| ||||| | ||
Sbjct 24984 TCGAAATCTTCACCTCCCAAGTGCGTGTCTCCTGCGGTAGCGAGGACCTCAAACACGCCG 25043
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | ||| || ||||| || || || || || ||| | | || |
Sbjct 25044 TCCTCGATGGAGAGGAGCGAGACGTCAAAAGTTCCGCCTCCAAGATCATAGACAAGGATT 25103
Query 7577 TTCGTATCG---TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
||| ||| | |||||||| ||| ||||| |||| || || || || |||
Sbjct 25104 CTCGACTCGGGTCCATCTTTGTT------GAGGCCGTAGGCGAGCGCGGCGGCGGTAGGT 25157
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | || || ||| ||| ||||| || || || |||| || || || ||
Sbjct 25158 TCGTTCAGGATTCGGAGAACGTTGAGGCCGGCGATCGTCCCCGCGTCCTTGGTTGCGGTG 25217
Query 7694 CGTTGCGAATCGTTAAAGT 7712
||||| | |||||| ||||
Sbjct 25218 CGTTGGGCATCGTTGAAGT 25236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633687618826880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |