Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq173114 100 4e-16 seq161514 87.8 2e-12 >seq173114 Length=471 Score = 100 bits (110), Expect = 4e-16 Identities = 266/398 (67%), Gaps = 10/398 (3%) Strand=Plus/Minus Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTC-AT 112651 || || ||| | ||||| || || || ||||||| || || || || || ||| | Sbjct 393 TCAAACATGCGTCACCGCCCTATCGGAGTCGGTGTGCAGGGACTTGCAGACACCTTCCAG 334 Query 112652 TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGA 112711 | | || || | ||||||| ||| || ||| || || ||||| || || ||||| Sbjct 333 TGTCTG-CGTCTTCCATTTGACTCCCCCGCAGCCAAAGAGCTCAATCAGCAGATCTTTGA 275 Query 112712 GACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATA 112771 ||| || || || || || || ||||| ||| | ||| |||| ||| || || || || Sbjct 274 GACTATCTACCATGCTGCGCTCGAGGCCAGTGCAGAGATGGCGGAGAAGGAGGGGCCCTA 215 Query 112772 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGG 112831 || || || || || || || || | ||| ||| || | |||||||||| | Sbjct 214 CGAGACGTTCGAAGGCAGCCCGGCGTCGCGCGGGCAGCTCCAGTACGATATGTGGGGTG- 156 Query 112832 TGAGACCAAGCTTCACTACG--ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 | | ||| |||| |||| | ||||||| || ||||||| || ||| ||| Sbjct 155 TCACACCGAGCT-CACTGTGGGACTGGGATGCGCTCAAGGCCAAGATTGTCAAGACGGGG 97 Query 112890 CTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 112947 || || ||| || || ||| || || ||||| || || || || |||||||||| Sbjct 96 CTGCGCAAC--TCGTTAGTGACAGCGCCGATGCCCACTGCGTCGACGAGCCAAATCTTGG 39 Query 112948 GTAATAATGAATGCTTTGAACCCTACACGACGAACATC 112985 | || || |||||||| || || || || | |||||| Sbjct 38 GCAACAACGAATGCTTCGAGCCGTATACCAGCAACATC 1 >seq161514 Length=192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||||| ||||| ||| |||| || || || ||||| ||||||||||| ||||| | Sbjct 157 CCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCAT 98 Query 102232 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 | |||| | |||| ||| | |||||||| || |||||||| || | ||||| ||| Sbjct 97 T-TGCGTCCATTTTCTGGATGAAGAAGCGCGGACTCATGCCGGGATTGACGTTCTCGAAC 39 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| ||| || ||||| ||| | ||| Sbjct 38 GAGCTCATCAGCCGCGACGAAGGAATGCAC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619329962743040