Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq177628 134 2e-26
>seq177628
Length=4820
Score = 134 bits (148), Expect = 2e-26
Identities = 312/468 (67%), Gaps = 2/468 (0%)
Strand=Plus/Plus
Query 18943 AGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAAT 19002
|||||| | || | ||| ||||||||||| || | |||||||| | || || |
Sbjct 2960 AGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGC 3019
Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062
||||| || ||||| || || ||||| || || | ||||| | |||||| || || |||
Sbjct 3020 TCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCA 3079
Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122
||||| || ||||||||||||||||| || || || ||||| || | | || || ||
Sbjct 3080 AATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCA-AA 3138
Query 19123 CTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGG 19181
| | | || | || ||||| || || ||||| ||||| || || | ||||||
Sbjct 3139 GGTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGG 3198
Query 19182 CATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATC 19241
|| ||||| | | || || |||||| || ||| | | ||| || ||| | ||
Sbjct 3199 GATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTC 3258
Query 19242 TATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAA 19301
|| | | |||| | || || ||||| ||||| || || ||||| || || ||
Sbjct 3259 GATGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAA 3318
Query 19302 ACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAAC 19361
|| | ||||||| ||| ||||| || | || | || | | || || || ||
Sbjct 3319 GCAGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGAC 3378
Query 19362 TATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATG 19409
|| || || || || || || || || ||||| |||||||||
Sbjct 3379 GATGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAATG 3426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560829777636480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |