Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq177628 134 2e-26 >seq177628 Length=4820 Score = 134 bits (148), Expect = 2e-26 Identities = 312/468 (67%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 18943 AGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAAT 19002 |||||| | || | ||| ||||||||||| || | |||||||| | || || | Sbjct 2960 AGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGC 3019 Query 19003 TCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCA 19062 ||||| || ||||| || || ||||| || || | ||||| | |||||| || || ||| Sbjct 3020 TCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCA 3079 Query 19063 AATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAA 19122 ||||| || ||||||||||||||||| || || || ||||| || | | || || || Sbjct 3080 AATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCA-AA 3138 Query 19123 CTAGCATCATTATTATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGG 19181 | | | || | || ||||| || || ||||| ||||| || || | |||||| Sbjct 3139 GGTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGG 3198 Query 19182 CATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATC 19241 || ||||| | | || || |||||| || ||| | | ||| || ||| | || Sbjct 3199 GATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTC 3258 Query 19242 TATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAA 19301 || | | |||| | || || ||||| ||||| || || ||||| || || || Sbjct 3259 GATGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAA 3318 Query 19302 ACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAAC 19361 || | ||||||| ||| ||||| || | || | || | | || || || || Sbjct 3319 GCAGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGAC 3378 Query 19362 TATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATG 19409 || || || || || || || || || ||||| ||||||||| Sbjct 3379 GATGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAATG 3426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560829777636480