Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq177628 210 4e-49 seq571 140 6e-28 seq161514 113 8e-20 >seq177628 Length=4820 Score = 210 bits (232), Expect = 4e-49 Identities = 392/570 (69%), Gaps = 13/570 (2%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| ||||| || |||||| ||| ||||| |||||||||||| | || |||| Sbjct 2970 AGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGA 3029 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | | || ||||| | ||||| || ||||| ||||||||| | || || || || | Sbjct 3030 ATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTG 3089 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA--AGAAGCGTT 48300 | ||||| || || || || |||||||| || | | ||| | || | | ||| Sbjct 3090 AAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAGGTGGAACGT- 3148 Query 48301 CTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTC 48360 ||||| |||||||| || |||||||| || || |||||| ||||| |||||||| Sbjct 3149 -TTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGATCGTCTC 3207 Query 48361 TATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAG 48417 | ||| ||| || | || | ||| | | || || ||| || |||| || Sbjct 3208 CACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGATGAGGAG 3267 Query 48418 CTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCT 48477 | | |||| |||| ||||| | || || || ||| || || || |||||| | Sbjct 3268 C---GAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGCAGCG 3324 Query 48478 GGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCC 48537 ||| || |||| ||||| | ||||| | |||||| || ||||| ||||| || || Sbjct 3325 GGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGATGCC 3384 Query 48538 ATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG 48597 || || || || |||||||| | |||||| || |||||||| |||||| | |||| Sbjct 3385 GTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAATGGCGTTCGTTGGCGTTGAG 3444 Query 48598 --AGCAT-TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA 48654 || | ||||| | | ||||| | | ||||| | || || ||||||||||| | Sbjct 3445 GTTGCTTGTCCAGTCGAGAACGTCGTGGGAGAGGTCTATCTCCTCTGCAGTCCAGAAGCA 3504 Query 48655 CGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || | || ||||||||||| |||||| Sbjct 3505 GGCCTGGGCCTTTTTGTACATTTGCCATAT 3534 Score = 118 bits (130), Expect = 2e-21 Identities = 176/250 (70%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | |||||| || |||||||| ||||||||| | ||||| | Sbjct 4761 TCTCGGAGTGAATATTCTCCATCATAATCTGGAAGCCGTAGAAGCAACGAGCCTCGGCGA 4702 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||||||| | ||||| | ||| ||||| ||||| ||||| || || || || |||| Sbjct 4701 CCTGCACTTCGTTCGAGAAACGCTCGAGCAGGTTCTCGTTGACAATGCCGTCGGACGCAG 4642 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTCC 48605 | || ||||| |||||||| | ||| || ||||||| | | |||| |||| Sbjct 4641 CGAAAAAGGCGAGGACATGRGAGATGAAGTGSCGCTCGTCGGCGTTGAGCTTGTTGTTCC 4582 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | ||| || |||||||| || || | ||||||||||| || || | Sbjct 4581 AGTCGTGCATGTCCTTCGACAGGTCCATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCCT 4522 Query 48666 TTTTGTACAT 48675 | || ||||| Sbjct 4521 TCTTATACAT 4512 >seq571 Length=811 Score = 140 bits (154), Expect = 6e-28 Identities = 326/490 (67%), Gaps = 9/490 (2%) Strand=Plus/Plus Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | |||| | ||||||||||| | || ||||||||||| ||||||||| Sbjct 9 CCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAAGAAG 68 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || |||||||| |||||||| || ||| | ||| | |||| |||| | ||| | | Sbjct 69 ATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTCGGTG 128 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC---C 48367 ||||| | |||||| || ||||| ||| ||| ||| || ||||| | || | Sbjct 129 ATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCGCGTTC 188 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 | ||| | | || ||| | | ||| || || || || ||| | ||| Sbjct 189 AGCAAGCGGTGTTT---CTCCACAGGATCCCTGACGTAAGTGTCGATTAGCAGGGAGTAA 245 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 | || ||||| || ||||| || |||||||| ||||||||| | |||||| Sbjct 246 GTTTCGGAGTGAACGTTCTCCATCATAATCTGGAATCCGTAGAAGCAGCGAGCCTCAGCG 305 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 ||||||||| ||| ||| | | | || || || ||||| || ||||| || || Sbjct 306 CACTGCACTTCATTGGCGAACCGTGCTACAAGGTTTTCGTTGACGATGCCATCCGAGGCG 365 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTC 48604 || || || || ||||| ||| | |||| ||||||| | | | | || | || Sbjct 366 GCGAAAAAAGCGAGGACGTGTGAGATGAAAAGGCGCTCATCATCGCTCAGCTTGTCCCTC 425 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | | ||| | | |||||| | ||| || |||||||||| ||||| |||| Sbjct 426 CAGTCGCGAGTGTCCTGGGACAGGTCGATTTCCTCGGCAGTCCAGAAAGACGCTTGTGCC 485 Query 48665 TTTTTGTACA 48674 | ||||||| Sbjct 486 TGCTTGTACA 495 >seq161514 Length=192 Score = 113 bits (124), Expect = 8e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 48137 AAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGC 48196 ||||| |||||| |||||||| |||||||||||| |||| ||||| | || ||| Sbjct 1 AAGTCGGTGTGCATTCCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGC 60 Query 48197 ATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCC 48256 |||| || | || || | ||||||||| | ||| || || || ||||||||||||||| Sbjct 61 ATGAGTCCGCGCTTCTTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCC 120 Query 48257 TCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA 48291 || || || ||||||||| ||| | ||| || || Sbjct 121 TCGACCGCGGCGAACGCGACGAGACGCTCGCCAAA 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929413190266880