Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq177628 134 3e-26 seq161514 111 3e-19 seq173114 96.9 6e-15 >seq177628 Length=4820 Score = 134 bits (148), Expect = 3e-26 Identities = 381/576 (66%), Gaps = 17/576 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||| ||||| || || |||||| || || ||||| || || Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATC-CAAAG---ACGAGCAGCATTTTCTCAA 25592 || | ||| | || |||| || | | | ||| | |||| | |||||| | Sbjct 3474 TCCCACGACGTTCTCGACTGG-ACAAGCAACCTCAACGCCAACGAACGCCATTTTATTTC 3416 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | || ||||| ||||| || ||||| || || || || |||||||| || ||| | Sbjct 3415 CCATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCG 3356 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| | || ||||| ||| || || ||| || ||||| ||||| || || || Sbjct 3355 TTTCTCAAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGAT 3296 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 ||||| | ||||| ||| ||| | ||| || || ||||| ||| || Sbjct 3295 GGAAAACATTCACTCCGAGACGTACTC---GCTCCTCATCGACACGTATATTCGTGATCC 3239 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || || | || ||||| | |||| | ||| || || | |||||| | || || Sbjct 3238 TGCTGAACGGGAGTATCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAAGC 3179 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGA-GCGCTACGTTTGGCGAGCGGCTGGTAG 25888 ||||| | ||||||||| | | || | | | || |||| |||||| |||| | Sbjct 3178 TGACTGGGCTCTCAAGTGGATCT-CGGACAAACGTTCCACCTTTGCCGAGCGCTTGGTGG 3120 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTT--TTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 | || || || || || || || || |||||| | || ||||| |||| |||||| | Sbjct 3119 CTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGG--TCATTTGCCTCCATTTTCTGGAT 3062 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 ||| || |||| ||||| || || || || || |||||||||||| | ||||| Sbjct 3061 CAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGA 3002 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042 ||| | |||| |||||||| ||| |||||| ||| Sbjct 3001 GGGCATGCACACCGATTTTGCATGCTTGCTCTTCAC 2966 Score = 98.7 bits (108), Expect = 2e-15 Identities = 178/260 (68%), Gaps = 7/260 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||| |||||||| || || |||||||||||| ||||| || ||| Sbjct 4503 ATTTGGCAAATGTATAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATGGACCTG 4562 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | ||||||||| ||| |||| || |||| | | ||||||| || || || Sbjct 4563 TCGAAGGACATGCACGACTGGAACAACAAGCTCAA--CGCCGACGAGCGSCACTTCATCT 4620 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || | || || || || || || || || || || |||||||| ||| |||| Sbjct 4621 CYCATGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGAGC 4680 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | ||||||||| || ||||| || |||||||| |||||||| | Sbjct 4681 GTTTCTCGAACGAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTATGA 4740 Query 25712 TCGAAAATGTGCACTCTGAG 25731 | || ||| | ||||| ||| Sbjct 4741 TGGAGAATATTCACTCCGAG 4760 >seq161514 Length=192 Score = 111 bits (122), Expect = 3e-19 Identities = 130/173 (75%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 ||||||||| |||| | || ||||||||||| || || || || || || || ||| Sbjct 179 TGGATCAACGACCAGCAGTCCACCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAG 120 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CAT 25964 |||||||| ||| |||||| |||||| |||| |||||| | ||| || | |||| ||| Sbjct 119 GGCATCTTCTTCTCCGGTTCATTTGCGTCCATTTTCTGGATGAAGAAGC-GCGGACTCAT 61 Query 25965 GCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACA 26017 ||| || || || || ||||||||||||||| | ||||| || | |||| Sbjct 60 GCCGGGATTGACGTTCTCGAACGAGCTCATCAGCCGCGACGAAGGAATGCACA 8 >seq173114 Length=471 Score = 96.9 bits (106), Expect = 6e-15 Identities = 176/249 (71%), Gaps = 8/249 (3%) Strand=Plus/Plus Query 221354 GACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGAC 221413 ||| |||| || || ||| ||| ||||||||| || | | || ||| | | || Sbjct 188 GACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCAT--CTCTGCAC 245 Query 221414 TG-CGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAG-TCTCTTGGCC 221470 || | || || ||||| |||||||| |||||||||||| || ||||| ||| ||||| Sbjct 246 TGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGAGCTCT-TTGGCT 304 Query 221471 TCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCG 221530 |||| || || || | |||||| ||| ||| ||| || |||||||| || ||| Sbjct 305 GCGGGGGAGTCAAATGGAAGACGCAGACACTGGAAGGTGTCTGCAAGTCCCTGCACACCG 364 Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTT 221589 | ||||| || | ||| | | |||| | |||| | ||||| || | ||||| |||| Sbjct 365 ACTCCGATAGGGCGGTGACGCATGTTTG-AGCGACGGGCTTCAGGGATCGGATAGTAGTT 423 Query 221590 GACGTCGAT 221598 ||| ||||| Sbjct 424 GACATCGAT 432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926731306542080