Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq166344 118 1e-21 >seq166344 Length=400 Score = 118 bits (130), Expect = 1e-21 Identities = 239/353 (68%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 47971 CCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGAT 48030 ||||||| || ||| || || || | ||||| | || |||||||| ||||| | Sbjct 400 CCACGTCGCGGGCTTTCGTGGTTGAACAAGATACCGTTGCAAGCATACATCCCGTACGCC 341 Query 48031 TCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGT 48090 ||||||||||| || ||||||||| | ||||| || || || || || || ||| Sbjct 340 TCACGATAGTTGACAACGATCCAGTACGCGTAGAGCTTCGCGCAGCCGTAGGGGGAGCGT 281 Query 48091 GGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTG 48150 || ||||| || |||||||| |||| || |||||| ||||| || ||||| ||| Sbjct 280 GGGTAGAACGGGGTGGTCTCGCTCTGAGGGGTCTCTACAACCTTGCCGTAAAGCTCAGAA 221 Query 48151 GTGGATGCTTGATAGATACGAACCCTATCTTCCA--TCTCAAGCAAACGGACTGCCTCAA 48208 || || || ||||||| || || | ||| | | || | || || || || | Sbjct 220 GTCGAAGCCTGATAGAAGCGGACGTGTTTTTCGAGGCCGCAGG--TGCGCACGGCGTCGA 163 Query 48209 GCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAA 48268 | | | ||| ||||| | | | || | || || ||||| | |||||| ||||| | Sbjct 162 GAAGGCGCAGCGTGCCGAGGCCGTCGACGTCGCCGGTGTACTCAGCCATCTCGAACGAGA 103 Query 48269 CCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTGC 48321 |||| || || ||| || || || || |||||||| || || |||||| Sbjct 102 CCTTGACGTGGGACTGCGCGCCGAGGTTGTAAATCTCGGTGGGCTGCACCTGC 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663980134042240