Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq181131 129 8e-25 seq2044 111 2e-19 seq181666 98.7 1e-15 seq171348 98.7 1e-15 seq179421 89.7 7e-13 seq179755 86.0 8e-12 >seq181131 Length=2697 Score = 129 bits (142), Expect = 8e-25 Identities = 242/356 (68%), Gaps = 0/356 (0%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || || || ||||| | | |||||||||||||| || || || | | | Sbjct 1407 CCCGAGGAGATCTCCTCCATGGTCCTTCTCAAGATGAAGGAGACCGCAGAGTCGTACCTC 1466 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | ||| | || | || || || || || || || ||||||| || || || || Sbjct 1467 GGCACCACTATCAACAACGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCCCAGCGT 1526 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | || | || | ||| || | || ||||| || Sbjct 1527 CAGGCCACCAAGGACGCCGGAACCATCTCTGGCATGAACGTCCTCCGGATCATCAACGAG 1586 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || || || || ||||| |||||||| | || || || || Sbjct 1587 CCCACCGCTGCCGCCATCGCCTACGGTCTCGACAAGAAGGTCGTCGGCGAGCGCAACGTC 1646 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| |||||||| || || || || ||||| || || || | || || | ||| Sbjct 1647 CTCATCTTCGATCTCGGAGGAGGAACCTTCGATGTGTCCCTCCTGACCATCGAGGAGGGT 1706 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| || ||||| || || ||||| || || | |||||||| || || || Sbjct 1707 ATCTTCGAGGTCAAGGCCACCGCCGGTGACACCCACTTGGGTGGTGAGGACTTTGA 1762 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391 || || ||||| |||||||| |||||||| ||||| ||| | || ||||| || ||||| Sbjct 999 TGCGTCGGTGTCTGGCAAAACGATCGTGTTGAGATCATCGCCAACGACCAGGGTAACCGC 1058 Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451 || || || || ||||| | || | || || || ||||| | || |||||||||||| Sbjct 1059 ACCACCCCCTCCTACGTCTCGTTCTCCGACAACGAGCGTCTTATCGGCGATGCCGCAAAA 1118 Query 195452 AATCAGACAGCTATGAACCCTATCAATAC 195480 ||||| || |||||||| || || || Sbjct 1119 AATCAAGTCGCAATGAACCCCATTAACAC 1147 >seq2044 Length=134 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || ||||| || ||||| ||||| || Sbjct 1 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTGGAGGTCGAGTCCTCG 60 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| ||||||||||| || ||||| || || || || || ||| Sbjct 61 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 120 Query 171982 CAACGACTTATTTT 171995 || || || || || Sbjct 121 CAGCGCCTCATCTT 134 >seq181666 Length=17563 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || || |||||||| || || |||||||||||||| || || || Sbjct 224 ATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAATCCTCG 165 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || ||||| || |||| || ||||| ||||||||||| || Sbjct 164 GATACCATCGACAATGTCAAGGCTAAGATCCAAGATAAGGAGGG 121 >seq171348 Length=246 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || ||||| || || |||||||| ||||| ||||| || Sbjct 6 ATGCAGATCTTCGTAAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCC 65 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| | || |||||||||||||| ||||| || Sbjct 66 GACACCATCGACAACGTTAAGGCCAAGATTCAAGACAAGGAGGG 109 >seq179421 Length=8220 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||||||||| |||||||| Sbjct 1778 ATGCAGATTTTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTCGAGTCGTCC 1719 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| || || || ||||| ||||| || Sbjct 1718 GACACCATCGACAATGTCAAGGCAAAAATCCAAGACAAGGAGGG 1675 >seq179755 Length=18176 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 171965 GCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTA 172024 |||| || ||||| ||||| || | || || ||||| || ||||||||||| || || | Sbjct 9603 GCATCCCCCCCGACCAGCAGCGGTTGATCTTCGCTGGCAAGCAGCTTGAAGACGGGCGCA 9544 Query 172025 CCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGG 172084 | ||| || |||||| | || ||||| || ||||| ||||| || || | || || | Sbjct 9543 CGCTCAGCGACTACAACATCCAGAAGGAATCGACTCTCCACCTGGTGCTCCGTCTGCGTG 9484 Query 172085 GTGGTGC 172091 ||||||| Sbjct 9483 GTGGTGC 9477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656365499895040