Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq180125 149 8e-30 seq181166 134 2e-25 seq177628 120 4e-21 seq571 120 4e-21 seq161514 102 1e-15 seq181576 93.3 5e-13 seq70650 91.5 2e-12 seq95962 89.7 6e-12 >seq180125 Length=1791 Score = 149 bits (164), Expect = 8e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 868682 GAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCG 868741 |||| || || |||| ||| || |||||| |||||||||||| |||||||| | Sbjct 1402 GAGATGTTTGCTTTGGAGTAGTCCGAGACGCGCTTCTCGAAAAAGTTCGTCTTGCCTTGC 1461 Query 868742 AGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCG 868801 || || |||| ||||| | ||| ||||| | || |||||| || ||| ||| Sbjct 1462 AGGGAAATCATATCCATGAAATCGAAAGGGTTTGCCGAATTGTAGACTTTATCGTTGCCG 1521 Query 868802 AGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTC 868861 || | | || |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1522 AGAGCGACTAGGAGGCGGTCAGCGACAAACTCGATGTACTGGCACATGAGCGTGGCGTTC 1581 Query 868862 ATGCCGATGAGCGCCACCGGCAGCG 868886 |||||||||||| | |||||||||| Sbjct 1582 ATGCCGATGAGCCCAACCGGCAGCG 1606 >seq181166 Length=959 Score = 134 bits (148), Expect = 2e-25 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 1627864 AACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGG 1627923 |||||||| || |||||||| ||||||||||| || ||||||||||||| ||||||| | Sbjct 185 AACACGTCCGCCAGGCCCTGGACGCCGACGCCGATGGGCCGGTGGCGCATGTTCGAGCGC 126 Query 1627924 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACG 1627983 |||| |||||| | ||||||| ||||| |||||| | ||||||||||||| | | ||| Sbjct 125 CGGGTCTCGGGGATGGGGTAGTAGTTGACGTCGATGATGCGGTTGAGGTTGTACGCGACG 66 Query 1627984 ACCT 1627987 |||| Sbjct 65 ACCT 62 Score = 120 bits (132), Expect = 4e-21 Identities = 355/541 (66%), Gaps = 20/541 (4%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040 ||||||||| || |||||||| || | || || ||| |||||||| |||||||| || Sbjct 870 CTGGTCGACCGTGAACTGGATCGCCTGCGCCGCCGGCTGCGTGCGCAGGTAGTACATCCC 811 Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGC 1627100 |||||||| ||||| |||| ||||| |||||| ||| | || | ||||| Sbjct 810 CGTCTTGAGCCCGCGCTTCCACCCGTAGAAGTGCATGCTCGTCAACTGCCCCATCGTCGG 751 Query 1627101 GTCGGCGCAG-TACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159 ||| |||| | || |||||| |||||||||| || | | |||| || Sbjct 750 CGCGG-GCAGGTGCACGTTGAGGCTCTGGCTCTGGCAGATGAACGCGCCGCGGTCNNNNN 692 Query 1627160 CCATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219 | | | | |||||||||||||||| |||| | |||| || Sbjct 691 NNNNNNNNNNNNNNNNCTTCTGGCTGATCTCCCACACGGTCTTGTAGATCGATTTGACGT 632 Query 1627220 CGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGT 1627279 || ||| | |||||| | | |||||| |||||| | ||||| |||| ||| Sbjct 631 CGTCCGGGA-----TCGTCGGGAT-GTTCTGCACGGAGCCGCGATGCGCGATGAGCATGT 578 Query 1627280 CGCGAAAGTCGGGCGTCC-ACAGGCCGCGCGCCATCAG---GCGCTTGA-CCAGGTGGCG 1627334 | || | ||||| |||||||| | | | || |||| | ||| | ||| Sbjct 577 TCTTCATGTTGT-CGTCCCACAGGCCGAGGTCGACGAGCTCGCGCAGCAGCCACG-GGCA 520 Query 1627335 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGAC 1627394 |||| | || ||||| ||||||||||| ||||||||||||||| | ||| Sbjct 519 CACGACCTGG---AACTCGCCGGAGAGCACGCGCCGCGTGTAGATGTTGCTCGTGTACGG 463 Query 1627395 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 1627454 |||| | |||| |||| || |||||||| ||||| || || ||||| |||| Sbjct 462 CTCGAAGCACTCGTTGTTCCCGAGGATCTGGCTCGTCGACGCGGTCGGCATCGGCGCGGT 403 Query 1627455 GAGGAGCGAGTTGCGCAGG-CCGTGCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCC 1627513 ||| || |||||||| ||| |||| | ||| || | || |||| ||||||||||| Sbjct 402 GAGCAGGGAGTTGCGGAGGCCCGTCTTCGCGATCTTG-GCCTTGAGCGTGTCCCAGTCCC 344 Query 1627514 A 1627514 | Sbjct 343 A 343 >seq177628 Length=4820 Score = 120 bits (132), Expect = 4e-21 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| || ||||| || |||||||||||||| ||| | |||| || || || Sbjct 4756 GAGTGAATATTCTCCATCATAATCTGGAAGCCGTAGAAGCAACGAGCCTCGGCGACCTGC 4697 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || ||| ||| || || |||||||||| || ||||||||| || |||||| Sbjct 4696 ACTTCGTTCGAGAAACGCTCGAGCAGGTTCTCGTTGACAATGCCGTCGGACGCAGCGAAA 4637 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 || || ||||| || ||| ||||| ||||||||| || ||||| ||||| | Sbjct 4636 AAGGCGAGGACATGRGAGATGAAGTGSCGCTCGTCGGCGTTGAGCTTGTTGTTCCAGTCG 4577 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 |||| ||||||| ||||||||||||||||| || || |||||||| || Sbjct 4576 TGCATGTCCTTCGACAGGTCCATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCCTTCTTA 4517 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 4516 TACATTTGCCA 4506 Score = 95.1 bits (104), Expect = 1e-13 Identities = 124/170 (73%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 869717 AGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAG 869776 ||||||||| ||||||||||| ||||||||| || |||| ||| || ||||| Sbjct 3365 AGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAA 3424 Query 869777 TGGCGCTCGTCGTCGCTGAGCGACAC----CCAGTGGACGGTGTCGGCGCTGAGGTCCAC 869832 ||||| |||| | || |||| | | ||||| || |||| | |||||| | Sbjct 3425 TGGCGTTCGTTGGCGTTGAG-GTTGCTTGTCCAGTCGAGAACGTCGTGGGAGAGGTCTAT 3483 Query 869833 CTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATA 869882 |||||| || ||||||| |||||| ||||||||||||||| | ||||| Sbjct 3484 CTCCTCTGCAGTCCAGAAGCAGGCCTGGGCCTTTTTGTACATTTGCCATA 3533 Score = 89.7 bits (98), Expect = 6e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 || ||| ||| ||||||||||| || || | |||||||||| ||||| | ||| Sbjct 2648 ACCCGCTTCTCAAAAAAGTTGGTTTTCCCTTGCAGCGAGATCATGTCCATGAAGTCGAAA 2707 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 || |||| | | ||| ||||||| || || | |||| ||||| || || ||| Sbjct 2708 GGATTGGATGCGTGGTACACCTTTTCGTTCCCAAGTGCGACGAGAAGGCGATCCGCCACA 2767 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAG 868872 || || |||||||||||||| || ||| |||||||| ||||| Sbjct 2768 AATTCAATGTACTGGCACATCAGTTTGGCATTCATGCCAATGAG 2811 >seq571 Length=811 Score = 120 bits (132), Expect = 4e-21 Identities = 176/246 (72%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 869219 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAG 869278 || ||||| || || || ||||||||||| || | ||| |||| ||| ||||| ||| Sbjct 9 CCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAAGAAG 68 Query 869279 ATGCCCTCGACGGCGGC-AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTT 869337 || ||||| || || || |||||| | ||| ||||| ||||| ||| || | || || Sbjct 69 ATACCCTCCACCGCCGCGAAAGCC-ACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTC--- 124 Query 869338 GTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 | |||||||||||| |||||| |||||||| ||||| || || | || |||| || Sbjct 125 GGTGATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCGC 184 Query 869398 GCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | | | | ||| || || | || ||| |||| || |||||||| || || || || Sbjct 185 GTTCAGCAAGCGGTGTTTCTCCACAGGATCCCTGACGTAAGTGTCGATTAGCAGGGAGTA 244 Query 869458 GGTCTC 869463 || || Sbjct 245 AGTTTC 250 Score = 95.1 bits (104), Expect = 1e-13 Identities = 171/245 (70%), Gaps = 5/245 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGC-CACTTG 869691 ||||| | |||||| || |||||||| ||||| ||| | |||| || |||| | Sbjct 252 GAGTGAACGTTCTCCATCATAATCTGGAATCCGTAGAAGCAGCGAGCCTCAGCGCACT-G 310 Query 869692 GACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 || || || |||||| | | ||||| ||| |||||||| || ||||||||| Sbjct 311 CACTTCATTGGCGAACCGTGCTACAAGGTTTTCGTTGACGATGCCATCCGAGGCGGCGAA 370 Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC--GACAC-CCAGTG 869808 |||||| |||||||| ||| || ||||||| || ||||| ||| | | | ||||| Sbjct 371 AAAAGCGAGGACGTGTGAGATGAAAAGGCGCTCATCATCGCTCAGCTTGTCCCTCCAGTC 430 Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | ||||| | ||||| | |||||||| ||||||| || || | |||| || Sbjct 431 GCGAGTGTCCTGGGACAGGTCGATTTCCTCGGCAGTCCAGAAAGACGCTTGTGCCTGCTT 490 Query 869869 GTACA 869873 ||||| Sbjct 491 GTACA 495 >seq161514 Length=192 Score = 102 bits (112), Expect = 1e-15 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||||||||| ||||| | ||||| || | | || |||||||| ||||||||| Sbjct 16 CCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGCATGAGTCCGCGCTTC 75 Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 || | ||| || |||| |||| || || ||||| |||||||||||||| ||||| || Sbjct 76 TTCATCCAGAAAATGGACGCA-AATGAACCGGAGAAGAAGATGCCCTCGACCGCGGCGAA 134 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTG 869323 ||| ||| |||||| |||||||| Sbjct 135 CGCGACGAGACGCTCGCCAAAGGTG 159 >seq181576 Length=18117 Score = 93.3 bits (102), Expect = 5e-13 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 1254448 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGA 1254507 ||||||| |||| |||||||||||||||||||| | || | ||| | |||||| |||| Sbjct 11396 CGATGCGTTCGAAGATGTCGTTGACAAACGAGTTGAGGATGGCCATGGCCTTGTTCGAGA 11455 Query 1254508 TGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 | ||| ||||||||| ||||||||||| || Sbjct 11456 TACCCGTGTCGGGGTGGACCTGCTTGAGGAC 11486 >seq70650 Length=436 Score = 91.5 bits (100), Expect = 2e-12 Identities = 139/192 (72%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 ||||| ||||| ||||| || || || ||| || |||||||||||||| | ||| Sbjct 117 GACGTTTGCCTTTGCGTAGTCAGAGACTCGTTTCTCAAAGAAGTTGGTCTTGCCTTGGAG 176 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCAT--CCG 868801 ||| |||| ||||| | ||| ||||||| || | | | || || | ||| ||| Sbjct 177 CGATATCATGTCCATGAAGTCGAAAGGGTTGGCCGACCCGAAC-GCCTTGC-CATTGCCG 234 Query 868802 AGCGACGCG-AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTT 868860 | | ||| |||| ||| |||||||| || ||||||||||| |||||| ||| ||| Sbjct 235 AAAG-CGCACAGCAAGCGATCGGCGACGAATTCGATGTACTGCTTCATGAGCACGGAGTT 293 Query 868861 CATGCCGATGAG 868872 ||| |||||||| Sbjct 294 CATTCCGATGAG 305 >seq95962 Length=178 Score = 89.7 bits (98), Expect = 6e-12 Identities = 61/68 (90%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 868824 CGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCA 868883 |||||||||||||||||||||||||||| ||||||||||||| |||||| | ||||||| Sbjct 1 CGACAAACTCGATGTACTGGCACATGAGCGCGGCGTTCATGCCAATGAGCCCAACCGGCA 60 Query 868884 --GCGACT 868889 |||||| Sbjct 61 GTGCGACT 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6092200801624144