Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq178708 95.1 1e-14 >seq178708 Length=17795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 268/407 (66%), Gaps = 20/407 (5%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| |||| ||||||||| ||||||||||| | | | | | |||| | Sbjct 13516 CGGCGGGTTCTTCAAGATGAAGGTGGTGAGCTTATGCCTCATATCGA-CAT-CCGTCCTT 13573 Query 34263 AC--CGCATGCTTTGCAGCCCTGACAGATAATGTTCT---TT--------TTAGCGGACA 34309 | | || |||||||| || || |||||||||| || || | ||| Sbjct 13574 TCTCCACAGGCTTTGCAATCCCGA---ATAATGTTCTCGATTCTGCCCGCTTTGAGGAT- 13629 Query 34310 CGATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAAC 34369 ||||||||| ||||| ||||| | || | || | || |||||| |||||| | Sbjct 13630 -GATGAGCTCGGTCTCGGGGTTCTTGCACGACTTGCAGAGGACGAACTTGTCGATGAAGC 13688 Query 34370 CATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGT 34429 | || ||||| || | | || ||| |||| ||||||||||||| | | |||| Sbjct 13689 CGTCGAGCAGTTCGCGGAGGCGGGTGGCGTCATGGGCGCCGTTGACGATGTACCTCTCGT 13748 Query 34430 TTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAA 34489 | || | ||| || || ||||| || ||||| || ||| | || || | ||| Sbjct 13749 TCTTCTCGTCGCAAGAGGTCTGGGCGCCTAGTTCGCAACCAAAGAATTTGGTAGTGTAGC 13808 Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||| ||||| | ||||| |||| || | ||||||| | ||| |||||||||| Sbjct 13809 TGGGGGGACGACTGAGCGCACGTGCGACGTCAGACATGTTGGGAAGGACGGTCTTGATGC 13868 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAG 34596 | || ||||| || || | |||| | || | ||||| ||||| Sbjct 13869 CATTTCCCTTGCCCTCAATTTTGGTGAGGAGGATGGGCATGCTGTAG 13915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411925704717776