Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq181166 136 4e-27 seq173114 107 2e-18 seq179421 89.7 5e-13 seq2044 87.8 2e-12 seq180125 82.4 7e-11 seq177628 82.4 7e-11 >seq181166 Length=959 Score = 136 bits (150), Expect = 4e-27 Identities = 271/397 (68%), Gaps = 6/397 (2%) Strand=Plus/Minus Query 148116 ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCG--ATGCGCT 148173 |||||||| | |||||||| | | |||| | || || || ||||| ||| || Sbjct 665 ATCTCCCACACGGTCTTGTAGATCGATTTGACGTCGTCCGGGAT--CGTCGGGATGTTCT 608 Query 148174 GCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCT 148233 |||| |||||||| ||||| | | | || ||| | ||| | ||| ||| | Sbjct 607 GCACGGAGCCGCGATGCGCGATGAGCATGTTCTTCATGTTGTCGTCCCACAGGCCGAGGT 548 Query 148234 CGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCC 148293 ||| || || | ||| || | ||| ||||| |||||||||| ||||||||||| Sbjct 547 CGACGAGCTCGCGCAGCAGCCACGGGCACACGACCTGGAACTCGCCGGAGAGCACGCGCC 488 Query 148294 GCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGG 148353 || || | ||||||||| |||| || || |||||||||| || | ||||| | Sbjct 487 GCGTGTAGATGTTGCTCGTGTACGGCTCGAAGCACTCGTTGTTCCCGAGGATCTGGCTCG 428 Query 148354 TCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTT 148413 ||| || || ||||| ||| ||||| |||||||| | || || || | Sbjct 427 TCGACGCGGTCGGCATCGGCGCGGTGAGCAGGGAGTTGCGGAGGCCCGTCTTCGCGATCT 368 Query 148414 TGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACT 148473 || ||| || | |||||||||| |||| ||| || ||| |||||||||||||| Sbjct 367 TGGCCTTGAGCGTGTCCCAGTCCCACAGCGAGCTCGGCGTGACGCCCCACATGTCGTACT 308 Query 148474 GCAGAATGCCGCGGCTA-GCGGGGCTGCCCTCGTACG 148509 |||| ||| | || | ||||||||||||||||||| Sbjct 307 GCAGCTCGCC-CTGCGACGCGGGGCTGCCCTCGTACG 272 >seq173114 Length=471 Score = 107 bits (118), Expect = 2e-18 Identities = 293/446 (66%), Gaps = 2/446 (0%) Strand=Plus/Plus Query 148304 GTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGT 148363 |||||| ||| |||| || || | |||||||||||||| || || |||| || || Sbjct 4 GTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGCAGT 63 Query 148364 GGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAG 148423 |||||| |||| || | ||||||||||| || || || ||| ||| || Sbjct 64 GGGCATCGGCGCTGTCACTAACGAGTTGCGCAGCCCCGTCTTGACAATCTTGGCCTTGAG 123 Query 148424 AGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCC 148483 || |||||||||| || | |||||| || |||||| |||||||| || || Sbjct 124 CGCATCCCAGTCCCACAGTGAGCTCGGTGTGACACCCCACATATCGTACTGGAGCTGCCC 183 Query 148484 GCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTC-GC 148542 ||| || |||||||| ||| ||| ||| || || | | | |||||| || || Sbjct 184 GCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCATCTCTGC 243 Query 148543 AGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCG 148602 | || ||||||||||| | | ||| || ||||| || ||| |||||| | Sbjct 244 A-CTGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGAGCTCTTTGG 302 Query 148603 CCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGC 148662 | | | || | || | |||||| | | || | ||| ||||| ||||| || | Sbjct 303 CTGCGGGGGAGTCAAATGGAAGACGCAGACACTGGAAGGTGTCTGCAAGTCCCTGCACAC 362 Query 148663 CCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGT 148722 | || || || || ||||| ||||| ||| | || || || |||||||| || Sbjct 363 CGACTCCGATAGGGCGGTGACGCATGTTTGAGCGACGGGCTTCAGGGATCGGATAGTAGT 422 Query 148723 TGCGGTCGATGATCTTGTCAAGATTG 148748 || |||||||| || ||| ||| Sbjct 423 TGACATCGATGATGCGGTTAAGGTTG 448 >seq179421 Length=8220 Score = 89.7 bits (98), Expect = 5e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| |||| || |||| |||||||||||||||||| Sbjct 1521 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 1580 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 ||| | ||||| ||||||||||| || ||||||| Sbjct 1581 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGC 1614 >seq2044 Length=134 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589 ||||| ||||||||||| || ||||| || |||||||| ||||| ||||| | Sbjct 131 ATGAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 72 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 || | |||||| | || ||| || || | |||| ||| |||||||| || || || ||| Sbjct 71 TCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTCACG 12 Query 133650 AAAATCTGCAT 133660 || |||||||| Sbjct 11 AAGATCTGCAT 1 >seq180125 Length=1791 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 120363 GACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAA 120422 |||||| ||||| |||||||| || ||||| | || ||||| | | ||| || ||||| Sbjct 1428 GACGCGCTTCTCGAAAAAGTTCGTCTTGCCTTGCAGGGAAATCATATCCATGAAATCGAA 1487 Query 120423 CGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTAC 120482 ||||| || || || ||| | ||| | || || || ||||| || || Sbjct 1488 AGGGTTTGCCGAATTGTAGACTTTATCGTTGCCGAGAGCGACTAGGAGGCGGTCAGCGAC 1547 Query 120483 AAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGC 120542 |||||| ||||||| ||||||| | ||||||||||| | | | | ||||||| ||| Sbjct 1548 AAACTCGATGTACTGGCACATGAGCGTGGCGTTCATGCCGATGAGCCCAACCGGCAGCGC 1607 >seq177628 Length=4820 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/218 (69%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 || ||| ||||| || ||||||| |||||||||||| || ||||| || || || Sbjct 2974 CAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGT 3033 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||| | || | | ||||| |||| |||| |||||| || ||||| Sbjct 3034 CAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAA 3093 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG-CCGTCTTGC 120817 ||| | || || ||| || || || |||| ||||||||| || || | ||| ||| Sbjct 3094 GAATATACCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAGGTGGAACGT-TTGT 3152 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGC 120855 ||||||||| | ||||| || || ||||||| Sbjct 3153 CCGAGATCCACTTGAGAGCCCAGTCAGC---TTTGCGC 3187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482320824311680