Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq571 237 2e-56 seq177628 150 3e-30 seq180125 132 7e-25 seq181166 111 2e-18 seq179920 100 4e-15 seq161514 93.3 6e-13 seq70650 86.0 9e-11 >seq571 Length=811 Score = 237 bits (262), Expect = 2e-56 Identities = 355/493 (72%), Gaps = 12/493 (2%) Strand=Plus/Minus Query 1455786 TGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGAC 1455845 ||||| || |||| | || || || ||||| |||||||| ||||||| | ||| Sbjct 495 TGTAC-AAGCAGGCACAAGCGTCTTTCTGGACTGCCGAGGAAATCGACCTGTCCCAGGAC 437 Query 1455846 ACGGTCCACTGG-GTGTC--GCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTC 1455902 || | ||||| | | | ||||||||| || ||||||| ||||||| ||||||||| Sbjct 436 ACTCGCGACTGGAGGGACAAGCTGAGCGATGATGAGCGCCTTTTCATCTCACACGTCCTC 377 Query 1455903 GCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAA 1455962 || ||||||||||||| ||||||||||| ||| ||||| | | || || || Sbjct 376 GC-TTTTTTCGCCGCCTCGGATGGCATCGTCAACGAAAACCTTGTAGCACGGTTCGCCAA 318 Query 1455963 AGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACAT 1456022 || || || | | ||||| || | || ||||| |||||||| || || ||| | Sbjct 317 TGAAGTGCAGTGCGCTGAGGCTCGCTGCTTCTACGGATTCCAGATTATGATGGAGAACGT 258 Query 1456023 CCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGA 1456082 ||||| ||||| ||||| || || |||||||| ||||||| ||| || || ||||| | Sbjct 257 TCACTCCGAAACTTACTCCCTGCTAATCGACACTTACGTCAGGGATCCTGTGGAGAAACA 198 Query 1456083 CCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGAT 1456142 || | | | ||| |||| || | || || ||||| |||||||| |||||| | Sbjct 197 CCGCTTGCTGAACGCGGTCGAGACCATCGAGTGCGTCAGGAACAAGGCCGAGTGGGCGGT 138 Query 1456143 GAAGTGGATCAACAAGGAGGGCCTCGACAC-TTTGCCGAGCGGCTCGTCGGCTTT-GCCG 1456200 ||||||||||| | || || | || ||| ||||| ||||| ||||| |||||| || | Sbjct 137 GAAGTGGATCACC---GACGGGCACGCCACTTTTGCGGAGCGCCTCGT-GGCTTTCGCGG 82 Query 1456201 C-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCG 1456259 | || ||||| ||||| ||||| ||| |||| ||| | || ||||||||||| || | Sbjct 81 CGGTGGAGGGTATCTTCTTCTCAGGCTCTTTCGCTGCCGTGTTCTGGCTCAAGAAACGGG 22 Query 1456260 GCCTCATGCCCGG 1456272 | || ||||| || Sbjct 21 GTCTGATGCCAGG 9 >seq177628 Length=4820 Score = 150 bits (166), Expect = 3e-30 Identities = 229/321 (71%), Gaps = 7/321 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| ||||||| || |||||||| || ||||| ||||||||||||||| | |||| Sbjct 4502 GATTTGGCAAATGTAT-AAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATGGACC 4560 Query 1455835 TCGGCG-CCGACACGGTCCACTGG---GTGTCGCTGAGCGACGACGAGCGCCATTTCATC 1455890 | | || |||| | | ||||| ||| | || ||||||||| || |||||| Sbjct 4561 T-GTCGAAGGACATGCACGACTGGAACAACAAGCTCAACGCCGACGAGCGSCACTTCATC 4619 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 || ||||||||| |||||||| || ||| ||||| || |||||||||| || Sbjct 4620 TCYCATGTCCTCGCC-TTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGA 4678 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 || || ||| || || || | | ||||| |||| || ||||| |||||||| Sbjct 4679 GCGTTTCTCGAACGAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTAT 4738 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || || || ||||| || || ||||| || |||||||||| ||| |||| || || Sbjct 4739 GATGGAGAATATTCACTCCGAGACATACTCTCTGTTGATCGACACATACATCAAAGAGCC 4798 Query 1456071 GGTCGAGAAGGACCACCTCTT 1456091 | ||| ||| ||||||| Sbjct 4799 CGCAGAGCGCGACTACCTCTT 4819 Score = 125 bits (138), Expect = 1e-22 Identities = 344/511 (67%), Gaps = 26/511 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||| |||||| ||| ||||| || |||||| | |||| Sbjct 3535 GATATGGCAAATGTAC-AAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACC 3477 Query 1455835 TCGGCGCCGACACGGTCCACTGG----GTGTCGCTGAGCGACGACGAGCGCCATTTCATC 1455890 || | |||| || ||||| | | || | || | |||| |||||||| || Sbjct 3476 TCTCCCACGACGTTCTCGACTGGACAAGCAAC-CTCAACGCCAACGAACGCCATTTTATT 3418 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 || ||| | ||||| || ||||||| || |||||||| ||||||||| || | Sbjct 3417 TCCCATGTCTTGGCCTTCTT-CGCCGCCTCGGACGGCATCGTCAACGAGAACCT--CCTG 3361 Query 1455951 CCGC-TTTATGAAA-GAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 || ||| | || || || || |||| || || | || || || || || ||| Sbjct 3360 GAGCGTTTCTCAAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATC 3301 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || |||||||| ||||| || || ||||||||||| |||||||| || | || Sbjct 3300 ATGATGGAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGAT 3241 Query 1456069 CCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 || | || ||| | || || ||| | || ||| | || | | | | || Sbjct 3240 CCTGCTGAACGGGAGTATCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAA 3181 Query 1456129 GCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGC 1456185 || |||||||| | ||||||||| |||| | | || || ||||||||||| || Sbjct 3180 GCTGACTGGGCTCTCAAGTGGATCTCGGACAA--ACG--TTCCAC-CTTTGCCGAGC-GC 3127 Query 1456186 TCGTCGGCTTTGCCG--CGTCGAGGGCATCT--TTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | | |||||| || ||| || || || | ||||| || || || | | |||| | Sbjct 3126 TTGGTGGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGC--CTCCATTT 3069 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 | ||| |||| ||||| || || ||||| || Sbjct 3068 TCTGGATCAAAAAGCGGGGGCTTATGCCGGG 3038 >seq180125 Length=1791 Score = 132 bits (146), Expect = 7e-25 Identities = 152/199 (76%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 1456569 CGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTT 1456628 |||||||||| | |||||||||||||||||||| ||||||||||||||||||| | | || Sbjct 1606 CGCTGCCGGTTGGGCTCATCGGCATGAACGCCA-CGCTCATGTGCCAGTACATCG-AGTT 1549 Query 1456629 TGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACC 1456688 |||||| |||||||| || | || |||||| | || || |||| |||| |||| Sbjct 1548 TGTCGCTGACCGCCTCCTAGTCGCTCTCGGCAAC-GATAAAGTCTACAATTCGGCAAACC 1490 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748 | ||| | ||||| |||| || || | |||||||| |||||||||||| |||| Sbjct 1489 CTTTCGATTTCATGGATATGATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCG 1430 Query 1456749 TGGC-GAGTACGCCAAGGC 1456766 | | || ||| |||| || Sbjct 1429 TCTCGGACTACTCCAAAGC 1411 >seq181166 Length=959 Score = 111 bits (122), Expect = 2e-18 Identities = 323/499 (65%), Gaps = 14/499 (3%) Strand=Plus/Plus Query 262918 GGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTG 262977 ||||| |||||||| ||||| |||| ||||| || || ||||| |||||||| Sbjct 382 GGCCTCCGCAACTCCCTGCTCACCGCGCCGATGCCGACCGCGTCGACGAGCCAGATCCTC 441 Query 262978 GGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCG 263037 || |||| |||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 442 GGGAACAACGAGTGCTTCGAGCCGTACACGAGCAACATCTACACGCGGCGCGTGCTCTCC 501 Query 263038 GGCGACTTTACCGTGGTCAACC---GCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTG 263094 ||||| || || || || | | ||| | ||| | || | | ||||||| Sbjct 502 GGCGAGTTCCAGGTCGTGTGCCCGTGGCTGCTGCGCGAGC---TCGTCGACCTCGGCCTG 558 Query 263095 T-GGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGA 263153 | ||||| | || | || |||||| ||| | ||||| |||||| | | Sbjct 559 TGGGACG-ACAACATGAAGAACATGCTCATCGCGCATCGCGGCTCCGTGCAGAAC-ATCC 616 Query 263154 CGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAA 263213 |||||| | ||| ||| |||| | ||| |||||||||||||||| | | | Sbjct 617 CGACGA-----TCCCGGACGACGTCAAATCGATCTACAAGACCGTGTGGGAGATCAGCCA 671 Query 263214 CCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCT 263273 | ||||||| | | || |||||||||| || Sbjct 672 GAAGNNNNNNNNNNNNNNNNNNNNNGACCGCGGCGCGTTCATCTGCCAGAGCCAGAGCCT 731 Query 263274 CAACCTGTACCTCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTG 263333 |||| || |||| ||| |||||| | | | ||| |||||| ||| | ||| Sbjct 732 CAACGTGCACCTGCCCGCGCCGACGATGGGGCAGTTGACGAGCATGCACTTCTACGGGTG 791 Query 263334 GCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCAT 263393 | ||||| |||||||| || |||||||| |||||||| | ||| || || | || || Sbjct 792 GAAGCGCGGGCTCAAGACGGGGATGTACTACCTGCGCACGCAGCCGGCGGCGCAGGCGAT 851 Query 263394 TCAATTCACCGTCGATCAG 263412 || ||||| ||||| ||| Sbjct 852 CCAGTTCACGGTCGACCAG 870 Score = 93.3 bits (102), Expect = 6e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 262420 CAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCGAA 262479 ||||||||| || | || ||| | || ||||||| | |||||| |||| | |||||| Sbjct 75 CAACCTCAACCGCATCATCGACGTCAACTACTACCCCATCCCCGAGACCCGGCGCTCGAA 134 Query 262480 TCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTT 262530 ||||||| || || || ||||||||||| |||||||| || |||||||| Sbjct 135 CATGCGCCACCGGCCCATCGGCGTCGGCGTCCAGGGCCTGGCGGACGTGTT 185 >seq179920 Length=6408 Score = 100 bits (110), Expect = 4e-15 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 165749 GGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCG 165808 |||||| ||||| | |||||||| |||| || ||||| |||||| ||||| ||||| Sbjct 5524 GGCAGATTTGGTCTCCTGGGGCGCGATCGGGGCACGCACGACCGAGTCGCAGGTCCACCG 5465 Query 165809 CGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGT 165868 ||| | ||||||||||| | |||||| ||||| |||||| ||||||||| ||||| Sbjct 5464 TGAGCTCACGTCGGCGCTGTCCATGCCCACGGGCTTTAAAAACTCCACCGACGGTAGCGT 5405 >seq161514 Length=192 Score = 93.3 bits (102), Expect = 6e-13 Identities = 109/142 (77%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 1456172 CTTTGCCGAGCGGCTCGTCGGCTTTGCCGCG-TCGAGGGCATCTTTTTCTCGGGCAGTTT 1456230 ||||| |||||| ||||||| || |||||| ||||||||||||| ||||| || || Sbjct 156 CTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCATT 97 Query 1456231 CTGCG-CCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAAC 1456289 |||| |||| || ||| | ||||||||||| |||||||| || | | | | | ||| Sbjct 96 -TGCGTCCATTTTCTGGATGAAGAAGCGCGGACTCATGCCGGGATTGACGTTCTCG-AAC 39 Query 1456290 GAATTTATCAGTCGCGACGAAG 1456311 || | ||||| |||||||||| Sbjct 38 GAGCTCATCAGCCGCGACGAAG 17 >seq70650 Length=436 Score = 86.0 bits (94), Expect = 9e-11 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 |||||||| |||||| || ||||||| |||||||| ||||| |||||||| ||| Sbjct 305 CTCATCGGAATGAACTCCGT-GCTCATGAAGCAGTACATCGAATTC-GTCGCCGATCGCT 248 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| || ||||| || | || | | || |||||||||| ||| | ||| Sbjct 247 TGCTGTGCGCTTTCGGCAATGGCAAGGCGTT-CGGGTCGGCCAACCCTTTCGACTTCATG 189 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCC 1456761 || |||| |||||| | |||||||||||||| || ||| || || | || ||||| Sbjct 188 GACATGATATCGCTCCAAGGCAAGACCAACTTCTTTGAGAAACGAGTCTCTGACTACGCA 129 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| ||||| Sbjct 128 AAGGCAAACGTCA 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7160253879025184