Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq177628 114 1e-20 >seq177628 Length=4820 Score = 114 bits (126), Expect = 1e-20 Identities = 372/568 (65%), Gaps = 20/568 (4%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 |||||||||||||||||||| || ||||| | || ||||| ||||| || | || | Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475 Query 43790 ACTAAAGACTTAGCACATTGGATT-GCA---TTAAAACCACAAGAAAAACATTTTATATC 43845 | | ||| | | |||| ||| | || ||| | ||| |||||||| || Sbjct 3474 TCCCACGACGTTCTCGACTGGACAAGCAACCTCAACGCCA-ACGAACGCCATTTTATTTC 3416 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCG 43905 || ||||| || || || || ||||| || ||||| || || | | || Sbjct 3415 CCATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCG 3356 Query 43906 GTTTGCGCAAG--AAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 || | |||| ||||||| ||||||| || || || ||||| |||||||| Sbjct 3355 TTT--CTCAAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATG 3298 Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG- 44022 || ||||| ||||| || || | |||| || || || || ||||| || ||| Sbjct 3297 ATGGAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCT 3238 Query 44023 ---GCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAA 44079 | ||| || | ||| |||| |||| | || || | || || || | || Sbjct 3237 GCTGAACGGGA-GTATC---TGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAA 3182 Query 44080 AGCAGACTGGGCCCTTAAATGGATAAATT-CAAATGATTCT--TTTGGAGAACGACTTGT 44136 ||| |||||||| || || ||||| |||| | | | |||| || || | || Sbjct 3181 AGCTGACTGGGCTCTCAAGTGGATCTCGGACAAACGTTCCACCTTTGCCGAGCGCTTGGT 3122 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 || || || | || ||||| || ||||||||||| || ||||| |||| || ||| | Sbjct 3121 GGCTTTCGCGGCCGTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGAT 3062 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGA 44256 || || || || | ||||| || ||||| || || |||||| | || || || || || Sbjct 3061 CAAAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGA 3002 Query 44257 AGGCTTACATTGCGATTTTGCTTGCTTG 44284 ||| | || ||||||||| |||||| Sbjct 3001 GGGCATGCACACCGATTTTGCATGCTTG 2974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396574237902160