Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq161514 113 6e-20 seq571 102 1e-16 seq177628 96.9 4e-15 seq173114 89.7 6e-13 >seq161514 Length=192 Score = 113 bits (124), Expect = 6e-20 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 || ||||| ||| |||||| || |||||||| || || |||||||| || |||||| Sbjct 16 CCTTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAATCCCGGCATGAGTCCGCGCTTC 75 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||| ||||||||| | |||||| || ||||||||||| ||||| || |||||| Sbjct 76 TTCATCCAGAAAATGGACGCAAATGAACCGGAGAAGAAGATGCCCTCGACCGCGGCGAAC 135 Query 130154 GCAAAGAGACGCTCAGCAAAGG 130175 || | ||||||||| |||||| Sbjct 136 GCGACGAGACGCTCGCCAAAGG 157 >seq571 Length=811 Score = 102 bits (112), Expect = 1e-16 Identities = 134/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 130073 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 130132 |||||||| |||||||| ||||| | |||||| | ||| || ||||| ||||||||| Sbjct 9 CCTGGCATCAGACCCCGTTTCTTGAGCCAGAACACGGCAGCGAAAGAGCCTGAGAAGAAG 68 Query 130133 ATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATC 130191 || |||||||| |||||| || | ||| ||||| || |||| ||| | | | | Sbjct 69 ATACCCTCCACCGCCGCGAAAGCCACGAGGCGCTCCGCAAAAGTGGCGTGCCCGTCGGT- 127 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TT 130250 | |||||||| |||||||| ||||| ||| || ||| || ||||| || ||| || Sbjct 128 GATCCACTTCACCGCCCACTCGGCCTTGTTCCTGACGCACTCGATGGTCTCGACCGCGTT 187 Query 130251 CA 130252 || Sbjct 188 CA 189 >seq177628 Length=4820 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||| ||| |||||| ||||||||||| || || Sbjct 2981 GCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTCAATCCC 3040 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| || |||||||| || | ||||||||| | |||||| || || ||||| || Sbjct 3041 GGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAGAATATA 3100 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGAC-TTTGTATCA-A 130193 || || || |||||| || | | ||||| |||||| | || || ||||| | | Sbjct 3101 CCTTCAACGGCCGCGAAAGCCACCAAGCGCTCGGCAAAG--GTGGAACGTTTGTCCGAGA 3158 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 |||||| | ||||| | || || || |||||| |||| |||| | || || | Sbjct 3159 TCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGATCGTCTCCACGGCATCGA 3218 Query 130254 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 130299 | || | || | ||| | ||||| || ||| | || ||||| Sbjct 3219 ACAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGATGAG 3264 >seq173114 Length=471 Score = 89.7 bits (98), Expect = 6e-13 Identities = 260/395 (66%), Gaps = 4/395 (1%) Strand=Plus/Plus Query 118184 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGC 118243 ||| ||| | || || ||||| ||||| || ||||| |||||||||||| || || || Sbjct 1 GATGTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGC 60 Query 118244 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTT 118303 |||||||| || || | | | ||| || || ||| | | ||| |||| Sbjct 61 AGTGGGCATCGGCGCTGTCACTAACGAGTTGCGCAGCCCCGTCTTGACAATCTTGGCCTT 120 Query 118304 GAGAGCGTCCCAGTCGTA-GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 118362 ||| || |||||||| | |||||| || | | | ||||||||| ||||||| Sbjct 121 GAGCGCATCCCAGTCCCACAGTGAGCTCGGTGTGACAC-CCCACATATCGTACTGGAGCT 179 Query 118363 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 118422 || | ||||| || || || || ||||| || || ||||| |||||||| | Sbjct 180 GCCCGCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCATCT 239 Query 118423 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCT 118482 | | || |||||||| || || || || || || ||||| || | ||| | | | Sbjct 240 CTGCACTGGCCTCGAGCGCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGAGCTCTT 299 Query 118483 TGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAAT-AAATACATCCGCGAGACCTTGG 118541 |||| || ||| ||||| | || | ||| | | | || || || || || || Sbjct 300 TGGCTGCGGGGGAGTCAAATGGAAGAC-GCAGACACTGGAAGGTGTCTGCAAGTCCCTGC 358 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 118576 ||||||| || || ||||| || | ||| || || Sbjct 359 ACACCGACTCCGATAGGGCGGTGACGCATGTTTGA 393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617028012545920