Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq173114 102 9e-17
seq161514 87.8 2e-12
>seq173114
Length=471
Score = 102 bits (112), Expect = 9e-17
Identities = 264/396 (67%), Gaps = 6/396 (2%)
Strand=Plus/Minus
Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC-AT 105261
|| || ||| | ||||| || || || ||||||| ||||| || || || ||| |
Sbjct 393 TCAAACATGCGTCACCGCCCTATCGGAGTCGGTGTGCAGGGACTTGCAGACACCTTCCAG 334
Query 105262 TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGA 105321
| | || || | ||||||| ||| || ||| || || ||||| || || |||||
Sbjct 333 TGTCTG-CGTCTTCCATTTGACTCCCCCGCAGCCAAAGAGCTCAATCAGCAGATCTTTGA 275
Query 105322 GACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATA 105381
||| || || || || || || ||||| ||| ||||| |||| ||| || || || ||
Sbjct 274 GACTATCTACCATGCTGCGCTCGAGGCCAGTGCAGAGATGGCGGAGAAGGAGGGGCCCTA 215
Query 105382 TGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGG 105441
|| || || || || || || || | ||| ||| || | |||||||||| |
Sbjct 214 CGAGACGTTCGAAGGCAGCCCGGCGTCGCGCGGGCAGCTCCAGTACGATATGTGGGGTG- 156
Query 105442 TGAGACCAAGCTTCACTACG--ACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGT 105499
| | ||| |||| |||| | ||||||| || ||||||| || ||| |||
Sbjct 155 TCACACCGAGCT-CACTGTGGGACTGGGATGCGCTCAAGGCCAAGATTGTCAAGACGGGG 97
Query 105500 CTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 105559
|| || ||| | | | || || ||||| || || || || |||||||||||
Sbjct 96 CTGCGCAACTCGTTAGTGACAGCGCCGATGCCCACTGCGTCGACGAGCCAAATCTTGGGC 37
Query 105560 AATAATGAATGCTTTGAACCCTACACGACGAACATC 105595
|| || |||||||| || || || || | ||||||
Sbjct 36 AACAACGAATGCTTCGAGCCGTATACCAGCAACATC 1
>seq161514
Length=192
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
|||||| ||||| ||| |||| || || || ||||| ||||||||||| ||||| |
Sbjct 157 CCTTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCAT 98
Query 94856 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
| |||| | |||| ||| | |||||||| || |||||||| || | ||||| |||
Sbjct 97 T-TGCGTCCATTTTCTGGATGAAGAAGCGCGGACTCATGCCGGGATTGACGTTCTCGAAC 39
Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
||||| ||| || ||||| ||| | |||
Sbjct 38 GAGCTCATCAGCCGCGACGAAGGAATGCAC 9
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 581933648375680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |