Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq181166 127 2e-24 seq69961 109 6e-19 seq177589 107 2e-18 seq177628 95.1 1e-14 seq173114 93.3 5e-14 >seq181166 Length=959 Score = 127 bits (140), Expect = 2e-24 Identities = 179/248 (72%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 20258 TACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGC 20317 |||||||||| | |||| |||||||| |||| || ||| |||||||||||| Sbjct 265 TACGAGACGTACGAGGGCAGCCCCGCGTCGCAGGGCGAGCTGCAGTACGACATGTGGGGC 324 Query 20318 GTCACTGAGAA-------TGAGTTTTGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGG 20370 ||||| || || | | ||| | | ||||||| ||||| || |||| Sbjct 325 GTCACGCCGAGCTCGCTGTGGGACTGGGA-CACGCTCAAGGCCAAGATCGCGAAG-ACGG 382 Query 20371 GCTTC-GCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGG 20429 || || ||||||| ||||| |||||| ||||||||||| ||||| ||||||| | | Sbjct 383 GCCTCCGCAACTCCCTGCTCACCGCGCCGATGCCGACCGCGTCGACGAGCCAGATCCTCG 442 Query 20430 GGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCG 20489 ||||||||||| |||||||||||||||| |||||||||| ||| || || ||| Sbjct 443 GGAACAACGAGTGCTTCGAGCCGTACACGAGCAACATCTACACGCGGCGCGTGCTCTCCG 502 Query 20490 GTGAGTTC 20497 | |||||| Sbjct 503 GCGAGTTC 510 Score = 105 bits (116), Expect = 7e-18 Identities = 123/165 (75%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||||||||||| || || ||| |||||||||| |||||||||||||||| ||| Sbjct 510 GAACTCGCCGGAGAGCACGCGCCGCGTGTAGATGTTGCTCGTGTACGGCTCGAAGCACTC 451 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 ||||||||| | ||||||| ||||| ||||||||||| || ||| || || || || Sbjct 450 GTTGTTCCCGAGGATCTGGCTCGTCGACGCGGTCGGCATCGGCGCGGTGAGCAGGGAGTT 391 Query 78627 CCGAAGACCATGCGTCTT---GATCTCGACCTTTAGGCCGTCCCA 78668 || || || |||||| ||||| | |||| || |||||| Sbjct 390 GCGGAGGCC---CGTCTTCGCGATCTTGGCCTTGAGCGTGTCCCA 349 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/127 (75%), Gaps = 6/127 (5%) Strand=Plus/Plus Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA---CCGAGGC 20070 ||||||| || || || || ||| ||||||| |||| ||||| | ||||| | Sbjct 63 GGTCGTCGCGTACAACCTCAACCGCATCATCGACGTCAACTACTACCCCATCCCCGAGAC 122 Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 |||| ||||| |||||||||||||| |||| ||||||||||||||||||| || Sbjct 123 CCGGCGC---TCGAACATGCGCCACCGGCCCATCGGCGTCGGCGTCCAGGGCCTGGCGGA 179 Query 20131 CGTTTTC 20137 ||| ||| Sbjct 180 CGTGTTC 186 >seq69961 Length=148 Score = 109 bits (120), Expect = 6e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 79770 CGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATC 79829 ||| |||||||||||||| ||||| || ||||| |||||| || | | ||| || | Sbjct 6 CGTGCCGGCGTTGAAGAGAGTCGGGGTGGCGTGGGTGAAGTACCGCTCGGACATGAGGTT 65 Query 79830 GTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAA 79889 ||||||||| ||||||| || |||| ||||| |||||||| ||||||||||||| Sbjct 66 GTACGTCTCGAGGACGCGCTCGATGTCGGAACCGTGAATGCCGACAGCGACGCGCATGAT 125 Query 79890 GAGGTACTGGGGCGTCTCGCCGA 79912 ||||| ||||| |||| ||| Sbjct 126 GAGGTGTTGGGGGCGCTCGACGA 148 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 19110 ACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGA 19169 |||| ||||||| ||||| |||||||| || || |||| || ||| |||| ||||| Sbjct 130 ACCTCATCATGCGCGTCGCTGTCGGCATTCACGGTTCCGACATCGAGCGCGTCCTCGAGA 71 Query 19170 CATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCG 19229 | ||| |||| ||| | || || |||||| ||||| || ||||| || |||||||||| Sbjct 70 CGTACAACCTCATGTCCGAGCGGTACTTCACCCACGCCACCCCGACTCTCTTCAACGCCG 11 Query 19230 GTACG 19234 | ||| Sbjct 10 GCACG 6 >seq177589 Length=846 Score = 107 bits (118), Expect = 2e-18 Identities = 162/223 (73%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGC-GACCAG 79742 ||||| | ||| || || |||||||| ||||| || |||||||| || | ||| ||||| Sbjct 684 GCGCAGTTCTTCAGGGTGTCGTAGATCCCCTCAATAGAGTCGTCTTTTA-AGCAGACCAA 626 Query 79743 GAAGCAGCTCGACATCTG-TG-GGTTGTT-CGTACCGGCGTTGAAGAGGGTCGGCGTCGC 79799 ||||| ||| | | || || ||| ||| || || ||||||||||| || || || Sbjct 625 AAAGCA---CGAGCTGAGCTGAGGATGTGGCGTGCCCGCATTGAAGAGGGTGGGGGTGGC 569 Query 79800 GTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTC 79859 ||| |||||| | | ||| |||| ||| ||||| ||||||| ||||||| Sbjct 568 GTGGGTGAAGTAGCGCTCCGACATGAGATTGTAGGTCTCAATGACGCGTTCGAGGTCGGA 509 Query 79860 GCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGC 79902 || || ||||| || ||||||||||||| |||| ||| ||| Sbjct 508 TCCATGAATGCCAACGGCGACGCGCATGATTAGGTGCTGAGGC 466 >seq177628 Length=4820 Score = 95.1 bits (104), Expect = 1e-14 Identities = 184/269 (68%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAG-AC 59651 |||||||||| || | ||| |||||| ||| ||||||||| ||||| | || || || Sbjct 4513 TGTATAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATGGACCT-GTCGAAGGAC 4571 Query 59652 CTGAAGGATTGGGACAA---GCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTG 59708 || | || ||| |||| |||||| |||||||| || |||||| ||||| Sbjct 4572 ATGCACGACTGGAACAACAAGCTCAACGCCGACGAGCGSCACTTCATCTCYCATGTCCTC 4631 Query 59709 GCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAG 59768 ||||| ||||| ||| || || ||||| | || || | | | || || || Sbjct 4632 GCCTTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGAGCGTTTCTCGAAC 4691 Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATC 59828 || || ||| | |||||||| || | ||||||| | ||| | | ||| ||| Sbjct 4692 GAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTATGATGGAGAATATT 4751 Query 59829 CACTCCGAGACGTACTCGCTCATGATCGA 59857 ||||||||||| ||||| || ||||||| Sbjct 4752 CACTCCGAGACATACTCTCTGTTGATCGA 4780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 60276 CAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGACCAATT-TA 60334 ||||||||| | ||||| ||||| ||||| | | | |||| ||| || | | || Sbjct 2781 CAGTACATTGAATTTGTGGCGGATCGCCTTCTCGTCGCACTTGG-GAACGAAAAGGTGTA 2723 Query 60335 CGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTT 60394 | || || |||||||||| ||||| | |||||| || ||||||| |||||||| Sbjct 2722 CCACGCATCCAATCCTTTCGACTTCATGGACATGATCTCGCTGCAAGGGAAAACCAACTT 2663 Query 60395 CTTTGAGAAGCGGGTCGGGGATTATTCAAA 60424 |||||||||||||| ||||||||||| Sbjct 2662 TTTTGAGAAGCGGGTATCAGATTATTCAAA 2633 >seq173114 Length=471 Score = 93.3 bits (102), Expect = 5e-14 Identities = 300/454 (66%), Gaps = 20/454 (4%) Strand=Plus/Minus Query 20027 AATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAAT 20086 || || || ||| |||||||| |||| || |||| | | || || || || Sbjct 447 AACCTTAACCGCATCATCGATGTCAACTACTATCCGATCCCTGAAGCCCGTCGCTCAAAC 388 Query 20087 ATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTC 20146 ||||| ||||| || |||| |||| || ||||| || || ||| ||| | || || Sbjct 387 ATGCGTCACCGCCCTATCGGAGTCGGTGTGCAGGGACTTGCAGACACCTTCCAG-TG-TC 330 Query 20147 GGCCTCT--CATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCG 20204 || ||| |||| ||| ||| || |||||||| || ||||| ||| | Sbjct 329 TGCGTCTTCCATTTGACTCCCCCGCAGCCAAAGAGCTCAATCAGCAGATCTTTGAGACTA 270 Query 20205 TGTACCACGCGGCCCTCCTGGAATCGTGC-GAACTCGCCAAAGAGGACGGCCCGTACGAG 20263 | ||||| || || ||| || |||| || | || | |||| || || |||||| Sbjct 269 TCTACCATGCTGCGCTCGAGGCCA-GTGCAGAGATGGCGGAGAAGGAGGGGCCCTACGAG 211 Query 20264 ACGTTCAAGGGGTCGCCCGCGTC-CGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCAC 20322 |||||| | || || ||||| || ||| | | ||||| || |||||||| ||||| Sbjct 210 ACGTTCGAAGGCAGCCCGGCGTCGCGCGGGCAGC-TCCAGTACGATATGTGGGGTGTCAC 152 Query 20323 TGAGAA-TGAGTTTTGGAGCG-----CCCTCAAGGTTGAGAT---CAAGACCCACGGGCT 20373 || | | | | ||| | | ||||||| |||| |||||| ||||| Sbjct 151 ACCGAGCTCACTGTGGGACTGGGATGCGCTCAAGGCCAAGATTGTCAAGACG---GGGCT 95 Query 20374 TCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAA 20433 ||||||||||| | ||||| ||||| || || ||||| ||| ||| |||| || Sbjct 94 GCGCAACTCGTTAGTGACAGCGCCGATGCCCACTGCGTCGACGAGCCAAATCTTGGGCAA 35 Query 20434 CAACGAGGCTTTCGAGCCGTACACGACCAACATC 20467 |||||| ||||||||||| || | ||||||| Sbjct 34 CAACGAATGCTTCGAGCCGTATACCAGCAACATC 1 Score = 89.7 bits (98), Expect = 6e-13 Identities = 296/454 (65%), Gaps = 20/454 (4%) Strand=Plus/Plus Query 78537 GATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596 ||||||| | || ||||||||||| |||||||| |||| ||| ||| ||||| || Sbjct 1 GATGTTGCTGGTATACGGCTCGAAGCATTCGTTGTTGCCCAAGATTTGGCTCGTCGACGC 60 Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTG---ATCTCGAC 78653 || ||||| || || || || || || || || || ||||||| |||| | | Sbjct 61 AGTGGGCATCGGCGCTGTCACTAACGAGTTGCGCAGCCC---CGTCTTGACAATCTTGGC 117 Query 78654 CTTTAG------GCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| || | |||||| | | ||| | || |||||||| || || | Sbjct 118 CTTGAGCGCATCCCAGTCCCACAGTGAGCTCGGTGTGACACCCCACATATCGTACTGGA- 176 Query 78708 GATACCCTCG-GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGA 78766 | | ||| || |||||||| || | |||||||||||| | ||||||| || || | Sbjct 177 GCTGCCCGCGCGACGCCGGGCTGCCTTCGAACGTCTCGTAGGGCCCCTCCTTCTCCGCCA 236 Query 78767 GTTC-GCA--TGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGA 78823 || ||| | ||||||| || || ||||| | || ||| ||||| || |||| Sbjct 237 TCTCTGCACTGGCCTCGAGC---GCAGCATGGTAGATAGTCTCAAAGATCTGCTGATTGA 293 Query 78824 GCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGC 78883 |||| || || ||| || | ||| | || | |||| || || || | Sbjct 294 GCTCTTTGGCTGCGGGGGAGTCAAATGGAAGACGCAGACACTGGAAGGTGTCTGCAAGTC 353 Query 78884 CCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCG 78943 |||| || |||| |||| || ||||| |||||||| ||||| | | ||| Sbjct 354 CCTGCACACCGACTCCGATAGGGCGGTGACGCATGTTTGAGCGACGGGCTTCAGGGATCG 413 Query 78944 GGTAAAAGTTCCGATCGATGACGCGGTTCAGGTT 78977 | || |||| |||||||| |||||| ||||| Sbjct 414 GATAGTAGTTGACATCGATGATGCGGTTAAGGTT 447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547276686670080