Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq181166 113 5e-20
seq2044 102 9e-17
seq177628 95.1 1e-14
seq181666 86.0 7e-12
seq181727 84.2 2e-11
seq161514 82.4 9e-11
>seq181166
Length=959
Score = 113 bits (124), Expect = 5e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 80695 TCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATC 80754
||||||| ||||| || | | ||||||||| ||||||||||| ||||||| | ||||
Sbjct 209 TCGAACGGCAAGCGCAGCGCGAGGAACACGTCCGCCAGGCCCTGGACGCCGACGCCGATG 150
Query 80755 GGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATG 80814
|| ||||||||| ||||||| ||| || ||| || || ||||| |||| ||||||
Sbjct 149 GGCCGGTGGCGCATGTTCGAGCGCCGGGTCTCGGGGATGGGGTAGTAGTTGACGTCGATG 90
Query 80815 ACGCGGTTCAGGTTG 80829
| |||||| ||||||
Sbjct 89 ATGCGGTTGAGGTTG 75
>seq2044
Length=134
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || || ||||| |||||
Sbjct 1 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACGCTGGAGGTCGAGTCCTCG 60
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||||| || |||||||||||||||||||| || || ||||||
Sbjct 61 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 120
Query 27526 CAGCGTCTAATTTT 27539
||||| || || ||
Sbjct 121 CAGCGCCTCATCTT 134
>seq177628
Length=4820
Score = 95.1 bits (104), Expect = 1e-14
Identities = 242/368 (66%), Gaps = 9/368 (2%)
Strand=Plus/Minus
Query 64504 GATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAAAGTATT 64563
|| |||||| | |||| || || | ||||||| | ||| | | |||| |||
Sbjct 3345 GAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGATGGAAAACATT 3286
Query 64564 CATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAGAAGGAT 64623
|| ||||||||| |||||| | || |||| || | |||| ||||||| || |||
Sbjct 3285 CACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCTGCTGAACGGGAG 3226
Query 64624 GGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATC 64683
|||||| || | ||||| | || | | | || ||||| ||||| ||
Sbjct 3225 TATCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAAGCTGACTGGGCTCTC 3166
Query 64684 CGGTGGATG------AATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGT 64737
|||||| || ||| || | |||| |||| | | ||||| ||
Sbjct 3165 AAGTGGATCTCGGACAAACGT---TCCACCTTTGCCGAGCGCTTGGTGGCTTTCGCGGCC 3109
Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797
|| ||||| || |||||||| |||||||| || ||||||||| | |||||||||||
Sbjct 3108 GTTGAAGGTATATTCTTTTCAGGGTCATTTGCCTCCATTTTCTGGATCAAAAAGCGGGGG 3049
Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAA 64857
|| ||||| || || | || ||||| ||||| ||| || |||||||| | |||
Sbjct 3048 CTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGAGGGCATGCACACC 2989
Query 64858 GAATTTGC 64865
|| |||||
Sbjct 2988 GATTTTGC 2981
>seq181666
Length=17563
Score = 86.0 bits (94), Expect = 7e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| |||||||| ||||| |||||||| || || || ||||| || ||
Sbjct 225 AATGCAAATCTTCGTCAAGACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAATCCTC 166
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|||| ||| | ||| | |||||||| || || || ||||||||
Sbjct 165 GGATACCATCGACAATGTCAAGGCTAAGATCCAAGATAAGGAGGG 121
>seq181727
Length=3334
Score = 84.2 bits (92), Expect = 2e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 30328 GGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGGG 30387
|| |||||||| ||| ||| | ||||| || ||| ||||| ||||| || |||||
Sbjct 776 GGCATTCCCATCGAGATTCACTCCACCGAGAACGTCTACATCCCGGAACTGATCTTTGGC 835
Query 30388 CACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAAT 30447
|| || | | | ||||||| | ||||||| ||| || | || || || || |||
Sbjct 836 CATCTCCTCGCGGGGTCCAACTTCGACGACGACGAGAAGAAGCTCACCGGGGGTCGCAAT 895
Query 30448 GGCTACGGTGCAAAGCTCGCCAAC 30471
||||| ||||| ||||||||||||
Sbjct 896 GGCTATGGTGCCAAGCTCGCCAAC 919
>seq161514
Length=192
Score = 82.4 bits (90), Expect = 9e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767
||||| ||||||||| || || ||| || || || || ||||| || || |||||
Sbjct 155 TTTGGCGAGCGTCTCGTCGCGTTCGCCGCGGTCGAGGGCATCTTCTTCTCCGGTTCATTT 96
Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827
|| ||||||||| | || ||||| || || ||||| || || |||| |||||||||
Sbjct 95 GCGTCCATTTTCTGGATGAAGAAGCGCGGACTCATGCCGGGATTGACGTTCTCGAACGAG 36
Query 64828 CTGATCTCTCGGGACGAGGG 64847
|| ||| || ||||| ||
Sbjct 35 CTCATCAGCCGCGACGAAGG 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569012715715840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |