Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2044 102 2e-16 seq171348 93.3 1e-13 seq179421 84.2 5e-11 >seq2044 Length=134 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 210981 AAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACG 211040 ||||| ||||| || ||||| || || | ||| ||||||||||| ||||| || ||| Sbjct 134 AAGATGAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACG 75 Query 211041 TTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100 || ||||| ||||| ||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 74 TTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTC 15 Query 211101 ACAAACACCTGCAT 211114 || || | |||||| Sbjct 14 ACGAAGATCTGCAT 1 >seq171348 Length=246 Score = 93.3 bits (102), Expect = 1e-13 Identities = 95/123 (77%), Gaps = 1/123 (1%) Strand=Plus/Minus Query 210993 TGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTG 211052 ||||| | ||| ||| ||| ||||||| || ||||| || ||||| ||||||||| Sbjct 126 TGTTGCTGCGGACTAACCCCT-CCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTG 68 Query 211053 TCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGC 211112 || ||| || ||||| || ||||| ||||| || |||||||||||||| || | |||| Sbjct 67 TCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGAGTCTTTACGAAGATCTGC 8 Query 211113 ATT 211115 ||| Sbjct 7 ATT 5 >seq179421 Length=8220 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| ||||| ||| || || || ||||||||||| || || |||||| Sbjct 1675 CCCTCCTTGTCTTGGATTTTTGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCG 1734 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||||||||| ||||| || ||||| || || | |||||| Sbjct 1735 AGGGTGATCGTCTTACCCGTCAGGGTCTTGACGAAAATCTGCAT 1778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156448527177680