Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07-
08] 182,032 sequences; 70,257,325 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq177628 141 8e-29
>seq177628
Length=4820
Score = 141 bits (156), Expect = 8e-29
Identities = 312/464 (67%), Gaps = 8/464 (2%)
Strand=Plus/Plus
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
|| || |||||||| |||| || ||||| | ||| || || || || || || ||
Sbjct 2975 AAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCATTCGAGAATGTC 3034
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
||||| ||||| | || | |||||| | ||| || || | |||||||||||| ||||||
Sbjct 3035 AATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAAAATGGAGGCAAATGACCCTGAAAAG 3094
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGG---CTTTG 4721
||||| ||||| ||||| || || || || || || | || || ||| ||||
Sbjct 3095 AATATACCTTCAACGGCCGCGAAAGCCACCAAGCG---CTCGGCAAAGGTGGAACGTTTG 3151
Query 4722 TCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATA 4781
|| ||||| || | ||||||| |||||| ||| | || || || || | |
Sbjct 3152 TCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTTGATACATGGGATCGTCTCCACG 3211
Query 4782 GCGTTAAATAATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
|| | || | |||| |||| || || ||||||| ||||| || || ||
Sbjct 3212 GCATCGAA-CAGATACTCCCGTTCAGCAGGATCACGAATATACGTGTCGATGAGGAGCGA 3270
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
||| | || || || || ||||| || || ||||| || || ||||| | |||||
Sbjct 3271 GTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAAACCATAGAAGCAGCGGGCTTC 3330
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
|| | ||||||||| | | || | || | | ||| ||||| || || |||||
Sbjct 3331 TGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTTCTCGTTGACGATGCCGTCCGA 3390
Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGT 5004
||| || || || ||||| ||||| || ||||| | ||||||
Sbjct 3391 GGCGGCGAAGAAGGCCAAGACATGGGAAATAAAATGGCGTTCGT 3434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426102184056656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |