Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq177628 120 4e-22 >seq177628 Length=4820 Score = 120 bits (132), Expect = 4e-22 Identities = 417/645 (65%), Gaps = 8/645 (1%) Strand=Plus/Plus Query 46543 AACTCTTGTTCAATAGTGACAGCATCCGATATTAT-CGATGTTACTGTTTCCTCACTTGG 46601 |||||||||||||| | || || |||| || || || || || || || | ||| Sbjct 2891 AACTCTTGTTCAATTCTTACCGCCTCCGTGATGATGCGCTGG-ACGGTGTCGGGATGTGG 2949 Query 46602 TGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCT 46661 | || ||| |||| | || | || ||||||||||| || | ||| || || | Sbjct 2950 CCGGCGCTTCAGATGTGTGAAGAGCAAGCATGCAAAATCGGTGTGCATGCCCTCGTCGCG 3009 Query 46662 ACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAA 46721 || || | || || || ||||| | || ||||| || || |||||||||| ||| || Sbjct 3010 GCTGATGAGCTCATTCGAGAATGTCAATCCCGGCATAAGCCCCCGCTTTTTGATCCAGAA 3069 Query 46722 TATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCT 46781 || | || || || || ||||||||||| ||||| || |||||||| || || | | Sbjct 3070 AATGGAGGCAAATGACCCTGAAAAGAATATACCTTCAACGGCCGCGAAAGCCACCAAGCG 3129 Query 46782 CTCTCCGTAACTGGCATCATTAT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTT 46838 ||| | | ||| | || | || |||||| | ||||||| ||||| || ||| Sbjct 3130 CTCGGCAAAGGTGGAACGTTTGTCCGAGATCCACTTGAGAGCCCAGTCAGCTTTGCGCTT 3189 Query 46839 TACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAAC 46898 | ||| || || || || | |||| || ||| | | |||| || ||| || Sbjct 3190 GATACATGGGATCGTCTCCACGGCATCGAACAGATACTCCCGTTCAGCAGGATCACGAAT 3249 Query 46899 ATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAA 46958 ||| || || || | || ||| | || || ||||||||||| || || ||||| Sbjct 3250 ATACGTGTCGATGAGGAGCGAGTACGTCTCGGAGTGAATGTTTTCCATCATGATTTGAAA 3309 Query 46959 TCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATT 47018 || || || || | ||||| | ||| || || | | || || || | || Sbjct 3310 ACCATAGAAGCAGCGGGCTTCTGCGGCCTGAACTTCGCTTGAGAAACGCTCCAGGAGGTT 3369 Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTT 47078 ||| || || || || || || || || || ||||| ||||| |||||||| Sbjct 3370 CTCGTTGACGATGCCGTCCGAGGCGGCGAAGAAGGCCAAGACATGGGAAATAAAATGGCG 3429 Query 47079 TTCATCGGTAGTCAGTT---TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135 ||| | || | || | | ||||||| | || | || | |||| || || Sbjct 3430 TTCGTTGGCGTTGAGGTTGCTTGTCCAGTCGAGAACGTCGTGGGAGAGGTCTATCTCCTC 3489 Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 || |||||||| | |||| || ||||| ||||| | |||||| Sbjct 3490 TGCAGTCCAGAAGCAGGCCTGGGCCTTTTTGTACATTTGCCATAT 3534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711312189066240