Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq179421 111 3e-19 seq171348 95.1 3e-14 seq2044 93.3 9e-14 seq181666 91.5 3e-13 seq177628 87.8 4e-12 seq180125 86.0 1e-11 >seq179421 Length=8220 Score = 111 bits (122), Expect = 3e-19 Identities = 87/104 (84%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||||||||| ||||| || || | ||||| ||||| || | ||||| ||| Sbjct 1675 CCCTCCTTGTCTTGGATTTTTGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCG 1734 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||||||||||| ||||| ||||| |||||||| Sbjct 1735 AGGGTGATCGTCTTACCCGTCAGGGTCTTGACGAAAATCTGCAT 1778 >seq171348 Length=246 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||| ||||| || || ||| | ||||| ||||| || | ||||| || Sbjct 109 CCCTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGGACTCGACCTCA 50 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| || || | |||||| ||||| ||||||||| Sbjct 49 AGGGTGATGGTCTTGCCAGTGAGAGTCTTTACGAAGATCTGCATT 5 >seq2044 Length=134 Score = 93.3 bits (102), Expect = 9e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 282966 AAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACG 283025 ||||| | || || ||||| || || ||||||||||| || ||||| || || ||| Sbjct 134 AAGATGAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTGACG 75 Query 283026 GTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTA 283085 | ||||| |||||||| | ||||| || || ||||| ||||| || || | ||||| Sbjct 74 TTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATGGTCTTGCCGGTGAGGGTCTTC 15 Query 283086 ACGAATATCTGCAT 283099 ||||| |||||||| Sbjct 14 ACGAAGATCTGCAT 1 >seq181666 Length=17563 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||| ||||||||||| || || || | ||||| || ||||| | ||| || ||| Sbjct 121 CCCTCCTTATCTTGGATCTTAGCCTTGACATTGTCGATGGTATCCGAGGATTCCACCTCG 180 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| || || | |||||| ||||| || |||||| Sbjct 181 AGGGTGATGGTCTTGCCAGTAAGAGTCTTGACGAAGATTTGCATT 225 >seq177628 Length=4820 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/183 (71%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || ||||||||||| | || ||| | || || || ||||| || || ||||| || Sbjct 2811 CTCATTGGCATGAATGCCAAACTGATGTGCCAGTACATTGAATTTGTGGCGGATCGCCTT 2752 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || ||| |||| || ||||| || | || || |||| || ||||| Sbjct 2751 CTCGTCGCACTTGGGAACGAAAAGGTGTACCACGCATCCAATCCTTTCGACTTCATGGAC 2692 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTA-TCAAAG 230401 | || || || || |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 2691 ATGATCTCGCTGCAAGGGAAAACCAACTTTTTTGAGAAGCGGGTATCAGATTATTCAAAA 2632 Query 230402 GCC 230404 ||| Sbjct 2631 GCC 2629 >seq180125 Length=1791 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| || |||||| | || || ||||| || || ||||| || | Sbjct 1592 CTCATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGCCTC 1533 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | || || || || |||| ||||| || || || ||||| |||| ||| ||||| Sbjct 1532 CTAGTCGCTCTCGGCAACGATAAAGTCTACAATTCGGCAAACCCTTTCGATTTCATGGAT 1473 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTC 230387 | ||||| || || || || || ||||| ||||| ||||| ||| Sbjct 1472 ATGATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCGTC 1428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044297905864928