Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq179421 109 5e-19 seq179755 95.1 1e-14 seq171348 93.3 4e-14 >seq179421 Length=8220 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || |||||||| ||||||||| ||||| |||||| Sbjct 1491 CCTCCACGCAGACGCAGAACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 1550 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| || |||||||| ||||||| ||| Sbjct 1551 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 1610 Query 41756 ACGCT 41760 | ||| Sbjct 1611 ATGCT 1615 >seq179755 Length=18176 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || |||||||| ||||| |||||| | Sbjct 9480 CCACCACGCAGACGGAGCACCAGGTGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGCTG 9539 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| |||| || ||||||||||| ||||| |||| ||||| ||||| | ||| Sbjct 9540 AGCGTGCGCCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAACCGCTGCTGGTCGGGGGGG 9599 Query 41756 ACGCT 41760 | ||| Sbjct 9600 ATGCT 9604 >seq171348 Length=246 Score = 93.3 bits (102), Expect = 4e-14 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||||||||||||||| | || || |||||||| |||||||| Sbjct 246 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAGCTGCTTTCCGGCGAA 187 Query 41731 TATCAGGCGCTGTTGGTC-CGCGGGA 41755 || || ||||||||||| |||||| Sbjct 186 GATAAGACGCTGTTGGTCGGGCGGGA 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461252073478400