Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq20 95.1 1e-14 >seq20 Length=67849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||||| ||||| || ||||| ||| | || |||||||| Sbjct 54303 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACGATCACCCTTGAAGTCGAATCTTCG 54362 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | | || | || ||| || ||| | || || ||| | ||| ||||||| Sbjct 54363 GATACTATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 54422 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGA--TTCCATGACTATGAACGATTACA 25009 ||||| || || | |||||| || || |||| || || | ||| || ||||||| Sbjct 54423 CAACGGTTGATCTTTGCGGGAAAGCAGTTGGAGGACGGTCGA--ACTTTGTCGGATTACA 54480 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 ||| ||||| ||| | || || ||||| || || ||| |||| || ||| Sbjct 54481 ACATTCAGAAGGAGTCTACACTCCATTTGGTCTTGCGACTGCGAGGTGGT 54530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418299748201280