Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq223 89.7 1e-12 >seq223 Length=304017 Score = 89.7 bits (98), Expect = 1e-12 Identities = 173/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAAT 94850 || || ||||||||||| || || || | || | ||| ||||| || || |||||||| Sbjct 175384 CCGCCCGCAGTCTTGGAAATCATGGCACAAGTCTTCAAG-GTATCGTAGATTCCCTCAAT 175326 Query 94851 GCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGA-AAGTTGGGGTGTGACTGTTCCAC 94909 || || | | | | | | |||||||||||| || | |||||| | || || Sbjct 175325 CGAGTCGTCCTTCATGGCGACCAAGAAGCACGAGGACAACTGGGGGTGGGGA-GTACCGG 175267 Query 94910 AATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTT 94969 || |||| ||||| || || ||||| || || || |||||||| | || || | Sbjct 175266 CGTTGAACAAGGTGGGCGAGGCGTGGGTGAAGTATCGCTCGGACATGAGGTTGTACGTCT 175207 Query 94970 CAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | ||||| | || |||| ||||| || |||||||| || ||||||||||| | || Sbjct 175206 CGATGACTTTCTCGACGTCTCGGCCGTGGATACCGACAGCGACTCGCATAATCATATGCT 175147 Query 95030 GAGGGCGCTC 95039 |||| || || Sbjct 175146 GAGGTCGTTC 175137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989573425676470