Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq223 98.7 1e-15 >seq223 Length=304017 Score = 98.7 bits (108), Expect = 1e-15 Identities = 263/402 (65%), Gaps = 0/402 (0%) Strand=Plus/Minus Query 72163 CCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAAC 72222 || || || ||||| || |||||||| | ||||| |||||| || ||| ||| | | Sbjct 175528 CCAGGTCGCTTGTTACCGCCCTGATCGACGTATCGAGCGGTAGCATCGTAAGCTCGAAGC 175469 Query 72223 ATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 72282 || || | ||||| || || ||| ||||| |||| || || ||| |||| ||| Sbjct 175468 ATGGGGACGATACCGTTCGAGTAACCGTTGGTACCGGCAATGTACGATCCCTTGGCTCGA 175409 Query 72283 ATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 72342 || ||| ||| | || || || || || | || || || | || || || Sbjct 175408 ATGTTGTGAATGTTCAATCCAATACCGCCCGCAGTCTTGGAAATCATGGCACAAGTCTTC 175349 Query 72343 AACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC 72402 || ||||| ||||| ||||| || || ||| ||||| | | || || ||| Sbjct 175348 AAGGTATCGTAGATTCCCTCAATCGAGTCGTCCTTCATGGCGACCAAGAAGCACGAGGAC 175289 Query 72403 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 72462 | ||| | | ||| || || || || ||||| || || ||||| || || || Sbjct 175288 AACTGGGGGTGGGGAGTACCGGCGTTGAACAAGGTGGGCGAGGCGTGGGTGAAGTATCGC 175229 Query 72463 TCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACC 72522 || |||| || ||||||||||| || || || | || | || || || || Sbjct 175228 TCGGACATGAGGTTGTACGTCTCGATGACTTTCTCGACGTCTCGGCCGTGGATACCGACA 175169 Query 72523 GCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 ||||| ||||| | |||||||||||||| ||| ||||| || Sbjct 175168 GCGACTCGCATAATCATATGCTGAGGTCGTTCGGCGATCCTG 175127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132203373840