Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq20 118 8e-22 >seq20 Length=67849 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| | || || || || || |||||||| ||| ||| ||| | ||||| Sbjct 54055 ACCAAATGCAAAGTCGATTCCTTCTGAATGTTGTAGTCGGACAGAGTTCGACCATCTTCA 53996 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||| || ||| | |||||||| || ||||| ||||||||||| ||||| Sbjct 53995 AGCTGTTTTCCGGCGAAAATCAAACGCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 53936 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || |||||||| || | || ||||||||||| || || || |||||||| || || Sbjct 53935 ATCTTGCTCTTAACGTTGTCGATGGTATCGCTCGACTCGACTTCCAAGGTAATCGTCTTT 53876 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||||||| || || || || |||||| Sbjct 53875 CCGGTCAGAGTCTTGACGAAGATCTGCATA 53846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362175518674794