Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq101 105 6e-18 seq20 95.1 1e-14 >seq101 Length=212447 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 |||||| |||| | || || ||||||||||| | ||||| ||||| ||| Sbjct 117963 ATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCCAAGATCCAGGAC 117904 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || ||||| || ||||| ||||| || ||||||| | || ||||||||| ||||||||| Sbjct 117903 AAGGAAGGAATTCCTCCTGATCAGCAGCGACTCATCTTCGCCGGCAAACAGCTCGAAGAT 117844 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984 | | ||| | | ||||| ||||| || || || |||||| | || ||||| |||| Sbjct 117843 GGTCGAACCCTTTCGGACTACAACATCCAGAAGGAGTCTACTTTGCACTTGGTCTTGAGG 117784 Query 26985 CTTAGAGGAGG 26995 || |||| || Sbjct 117783 CTGCGAGGTGG 117773 >seq20 Length=67849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || || ||||| | |||||| | || | ||||| Sbjct 53619 ATGCAAATCTTCGTCAAGACCTTGACCGGAAAGACAATCACCTTGGAGGTCGAATCTTCG 53678 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | ||||| |||||| |||||||| || || || || ||||| Sbjct 53679 GACACTATCGACAACGTCAAGTCTAAGATTCAGGACAAAGAGGGTATCCCCCCTGATCAG 53738 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || ||| || ||||||||||||| ||| | |||||| ||| Sbjct 53739 CAACGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGAACACTTTCCGACTACAAC 53798 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || ||||| | || |||| || |||| |||| || Sbjct 53799 ATCCAGAAGGAGTCTACCTTGCACTTGGTTCTCCGACTCCGAGGCGG 53845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478657409944480