Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq501 125 1e-23 >seq501 Length=137356 Score = 125 bits (138), Expect = 1e-23 Identities = 265/385 (69%), Gaps = 13/385 (3%) Strand=Plus/Minus Query 42753 GCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||||||| || |||| || ||||| ||| | || ||||| ||||| Sbjct 93095 GCATCCATCTTCTGGCTCAAGAAGCGAGGTCTC-ATGCCGGGATTGACGTTCTCCAACGA 93037 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 | | ||| | || || || || || | |||||||| ||||| || ||| | ||| Sbjct 93036 ATTGATCTCGCGTGATGAAGGTCTCCACACCGACTTTGCATGCCTGCTCTTCAC---CCA 92980 Query 42872 CCTCAGGC-ACAAGCCCTCGAAG-GAGCG-GGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||||| || || | | | | | || || || || |||||||| ||| ||||| || Sbjct 92979 CCTCAAGCGACGACCTCACCCGGAGACCGTGGAACG---CATCATCAAGGAAGCCGTCGA 92923 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988 |||| || ||| | || | | ||||| || || ||||||||||| | | Sbjct 92922 CCTCGAATGTGAATTCTTGACCGACGCCTTGCCCTGTTCGCTCATCGGCATGAACGAAAA 92863 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACC-ATCTCCTGTGCCAGATGGGTCTCA 43047 ||||||||| | ||||| | | ||||||||||| || | || || | || | Sbjct 92862 GCTCATGTGCCAATACATTCGATTCGTCGCCGACCGATTGCTCGTCGCA-CTCGGAAACG 92804 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 | | |||||| | ||| |||||||||||||||||||| ||| || |||| | Sbjct 92803 ACAAGGTGTACAACGATACCAACCCGTTCGACTTTATGGAGAACATTTCGCTGCAGGGTA 92744 Query 43108 AGACCAACTTTTTCGAGAAGCGCGT 43132 | |||||||||||||| ||| || Sbjct 92743 AAGCCAACTTTTTCGAGTCGCGTGT 92719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944329355263840