Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq223 109 5e-19 >seq223 Length=304017 Score = 109 bits (120), Expect = 5e-19 Identities = 144/198 (73%), Gaps = 14/198 (7%) Strand=Plus/Plus Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| ||||| || ||||||||||| || | |||||||||| ||||||||||||||| Sbjct 175593 TCTACCTCGAACCTTGGCACGCGGATGTCTTCGATTTCATCGACTTGCGAAAGAACCACG 175652 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || | | || ||||| | |||||||| |||||| | || ||| | |||| Sbjct 175653 GCAAGGAAGAAGTCCGAGCTCGAGACTTGTTCTACGCGCTCTGGATTCCGGACATGTTTA 175712 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCT-----TT--TTTGTCCCAATGAATGT 94359 || ||| || ||| |||| ||||| || || | |||||||| || || Sbjct 175713 TGCGACGTGTAGAG------TCCG-ATGGAGACTGGGCGTTGATGTGTCCCAACGAGTGC 175765 Query 94360 CCCGGACTGTCCGACGTT 94377 |||||| ||||||||||| Sbjct 175766 CCCGGATTGTCCGACGTT 175783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718042510640