Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq20 109 4e-19
>seq20
Length=67849
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| |||||||| || || ||| || ||||| |||||||| || | | |||||
Sbjct 54520 AGTCGCAAGACCAAATGGAGTGTAGACTCCTTCTGAATGTTGTAATCCGACAAAGTTCGA 54461
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| ||||||||||| || ||||| |||| || || || || | || | |||||||
Sbjct 54460 CCGTCCTCCAACTGCTTTCCCGCAAAGATCAACCGTTGCTGGTCAGGCGGGATGCCCTCC 54401
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | || || || | || || || | ||
Sbjct 54400 TTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTATCCGAAGATTCGACTTCAAGGGTG 54341
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||||| ||||| ||||| || || || || ||||||||
Sbjct 54340 ATCGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 54303
Score = 87.8 bits (96), Expect = 1e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 48586 TATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCT 48645
|| |||| ||||| | | | | | |||| ||||||||||| |||||||| |||| |||||
Sbjct 54778 TACTGTAGTCAGACAAAGTCCTACCGTCTTCCAACTGCTTTCCGGCAAAGATCAATCGCT 54719
Query 48646 GTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACT 48705
| || || | ||||| ||| || ||||| |||||| || ||| | | | |
Sbjct 54718 GCTGGTCGGGGGGAATGCCTTCTTTGTCCTGAATCTTCGACTTGACATTGTCAATCGTAT 54659
Query 48706 CTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGT 48748
| |||| ||| || |||| ||| || || ||||| |||| |||
Sbjct 54658 CCGACGACTCGACTTCCAACGTGATAGTCTTTCCGGTCAGAGT 54616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380933728007382
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |