Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 6e-15 >seq20 Length=67849 Score = 98.7 bits (108), Expect = 6e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | ||||||| |||||||||||||||||| || || || | ||||| Sbjct 53569 TTGTAATCCGAGAGAGTTCGACCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCGTTGC 53510 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| ||||||||||||||||| |||||||| |||||| || || || || Sbjct 53509 TGATCAGGGGGAATTCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATTGTGTCG 53450 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTT 480757 | | ||| || || || || || |||||||| ||||| Sbjct 53449 GAGGACTCGACTTCGAGAGTGATCGTCTTTCCGGTGAGGGTCTT 53406 Score = 96.9 bits (106), Expect = 2e-14 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||||| ||||||||| || ||||| || ||||| | ||| || || ||||||||| Sbjct 54013 AGAGTTCGACCATCTTCAAGCTGTTTTCCGGCGAAAATCAAACGCTGCTGGTCAGGAGGA 53954 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGT 480724 |||||||||||||| || ||||| || || || || ||||| | | | | | Sbjct 53953 ATTCCTTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATGGTATCGCTCGACTCGACT 53894 Query 480725 TTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||| |||||| || || ||||| |||||||| ||||| || || Sbjct 53893 TCCAA-GGTAATCGTCTTTCCGGTCAGAGTCTTGACGAAGATCTG 53850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268143425693432