Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq20 104 2e-17 >seq20 Length=67849 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| || | || || || || || ||||| || || | || || || | Sbjct 53833 CGGAGAACCAAGTGCAAGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGTGTTCGGCCA 53774 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || |||||||| || || || | ||||||| ||||||||| || || |||||||||||| Sbjct 53773 TCTTCGAGTTGCTTTCCGGCGAAGATCAATCGTTGCTGATCAGGGGGGATACCCTCTTTG 53714 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| || | ||||| | || | |||||| ||| ||| || || | || || Sbjct 53713 TCCTG-AATCTTAGACTTGACGTTGTCGATAGTGTCCGAAGATTCGACCTCCAAGGTGAT 53655 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || || || || ||||| Sbjct 53654 TGTCTTTCCGGTCAAGGTCTTGACGAAGATTTGCAT 53619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385215284487594