Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq52 98.7 2e-15 >seq52 Length=53616 Score = 98.7 bits (108), Expect = 2e-15 Identities = 185/265 (70%), Gaps = 8/265 (3%) Strand=Plus/Minus Query 279874 GGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGT 279933 |||||| ||||||| || || || | | ||| |||| ||||| |||| | || Sbjct 9583 GGATGGCCTGAAACCGGGTCAACGGAAAGTCTTGTTCGGTTGCTTCAAGCGAAAGCTTGT 9524 Query 279934 AAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCA 279993 || ||||| || || || || || ||||| ||||| ||| | | | ||| ||||| Sbjct 9523 CAAAGAAATCAAGGTCGCACAATTGGCCGGTTACGTTTCCGAAAAGACGGCTTACCATCA 9464 Query 279994 CGGTGAAGCGTCTCT--TCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTAT-GGCTTC 280050 |||||| ||| || ||| | | || || ||||| || ||| | ||| | ||| | Sbjct 9463 TGGTGAACAGTCGCTCGTCATGACG--ATCGTTGGTCTCGCGCAAAACTTTGTTGGCAGC 9406 Query 280051 AAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGGTTCTCGTATTCACAA-TGGAA 280109 || |||| | || || || |||| || |||||||| ||| ||||||| | || ||| | Sbjct 9405 AA-CAACATCAACCTTCTCGCACCGAACGGTCAATTCGGTACTCGTAT-CGCAGGTGGTA 9348 Query 280110 AAGATCATGGTAGTGCTCGTTACAT 280134 ||||| || |||||||||||||| Sbjct 9347 AAGATGCTGCCAGTGCTCGTTACAT 9323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186800118163474