Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq20 89.7 5e-13 seq501 86.0 6e-12 >seq20 Length=67849 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || |||||||| | ||||| | || |||||| | Sbjct 53619 ATGCAAATCTTCGTCAAGACCTTGACCGGAAAGACAATCACCTTGGAGGTCGAATCTTCG 53678 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | || || || ||| || ||||||||||| || || |||||| Sbjct 53679 GACACTATCGACAACGTCAAGTCTAAGATTCAGGACAAAGAGGGTATCCCCCCTGATCAG 53738 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| || | || | || ||| || ||||||||||||| ||| | ||| ||||| Sbjct 53739 CAACGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGAACACTTTCCGACTACAAC 53798 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || || || || || ||| | || || || Sbjct 53799 ATCCAGAAGGAGTCTACCTTGCACTTGGT 53827 >seq501 Length=137356 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 110747 GCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTG 110806 |||||||| |||||||||||||||| | |||| | ||| |||||||||| || || Sbjct 93571 GCAGCGAAGAAGGCGAGAACGTGTTCGATAAAGTACTTTTCATTGTCGTTCATCTTGTTC 93630 Query 110807 TTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGACCTTCCAGTGACAAT-CGAC 110865 | |||||| | | ||| ||| | || |||||||||| | ||||| || || | | Sbjct 93631 TCCCAGTCGTGCACATCCATGGCGAGGTTGATCTCTTCGGCAGTCCAG-AACGATGCTTC 93689 Query 110866 CGCCTTCTTGTACGATTGCCAAAGATCT 110893 |||||||||||| ||||| |||||| Sbjct 93690 GGCCTTCTTGTACATTTGCC--AGATCT 93715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445089759890880