Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq829 100 3e-16
>seq829
Length=85973
Score = 100 bits (110), Expect = 3e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 6782 TTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCG 6841
||||| |||||||||| ||| | |||||| ||||| || || ||| | ||||
Sbjct 14252 TTCGGATTCCACGCGCTCATGATGATCCTCCTGTCCGTCGGATTGTTCTTGATCTTGTCA 14311
Query 6842 ATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATAC 6901
||||| | | ||||| ||| |||| |||||| ||| || | |||| | | |||
Sbjct 14312 ATCACCTGCGCAAGCTGATCCACTCCTCGTCCCGTATAATCGTCCTCGCACGTCTTGTAC 14371
Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961
|| ||||| || || |||||||||||||| || || |||||||| || || ||| ||||
Sbjct 14372 TCTGCCCCGAAATGCCTCCACTGGAACCCATACACAGGGCCCAAATCACCTTCCCTCCGA 14431
Score = 100 bits (110), Expect = 3e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 34384 TCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGA 34443
|||| ||| || || |||||||| || || |||||||||||||| || || ||||| ||
Sbjct 14431 TCGGAGGGAAGGTGATTTGGGCCCTGTGTATGGGTTCCAGTGGAGGCATTTCGGGGCAGA 14372
Query 34444 GTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGAT 34503
||| | | |||| | || ||| |||||| |||| ||| ||||| | | |||||
Sbjct 14371 GTACAAGACGTGCGAGGACGATTATACGGGACGAGGAGTGGATCAGCTTGCGCAGGTGAT 14312
Query 34504 CGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAA 34563
|||| | ||| || || ||||| |||||| | ||| |||||||||| |||||
Sbjct 14311 TGACAAGATCAAGAACAATCCGACGGACAGGAGGATCATCATGAGCGCGTGGAATCCGAA 14252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448257726864480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |