Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq223 86.0 9e-12 >seq223 Length=304017 Score = 86.0 bits (94), Expect = 9e-12 Identities = 254/392 (65%), Gaps = 0/392 (0%) Strand=Plus/Minus Query 78144 CCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAAC 78203 |||||||| || ||||| |||||||| | |||| ||||| || ||| ||| | | Sbjct 175528 CCAGGTCGCTTGTTACCGCCCTGATCGACGTATCGAGCGGTAGCATCGTAAGCTCGAAGC 175469 Query 78204 ATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGA 78263 || || | |||||||| || || || || || | ||| || ||| | || ||| Sbjct 175468 ATGGGGACGATACCGTTCGAGTAACCGTTGGTACCGGCAATGTACGATCCCTTGGCTCGA 175409 Query 78264 ATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTC 78323 || || |||| | || || || || || |||| || || | || ||| ||| Sbjct 175408 ATGTTGTGAATGTTCAATCCAATACCGCCCGCAGTCTTGGAAATCATGGCACAAGTCTTC 175349 Query 78324 AATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGAC 78383 || ||||||||||| ||||| || ||| ||| ||||| | | || || ||| Sbjct 175348 AAGGTATCGTAGATTCCCTCAATCGAGTCGTCCTTCATGGCGACCAAGAAGCACGAGGAC 175289 Query 78384 ATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTT 78443 | || | || ||| || || || || || || || || || || || || || Sbjct 175288 AACTGGGGGTGGGGAGTACCGGCGTTGAACAAGGTGGGCGAGGCGTGGGTGAAGTATCGC 175229 Query 78444 TCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACC 78503 || || | || ||||| || || || || || | ||| | || || || || Sbjct 175228 TCGGACATGAGGTTGTACGTCTCGATGACTTTCTCGACGTCTCGGCCGTGGATACCGACA 175169 Query 78504 GCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || ||||| | |||||||||||||| ||| Sbjct 175168 GCGACTCGCATAATCATATGCTGAGGTCGTTC 175137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661558077760