Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 6e-12 >seq6 Length=242052 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || ||||| || || ||||| |||||| Sbjct 168783 CCACCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAA 168842 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || || |||||||||||| |||||| ||||||||||| ||||| Sbjct 168843 AGAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATCAATCGTTGCTGATCAGGAGGG 168902 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | || | | || | ||||| | || ||| || Sbjct 168903 ATACCCTCCTTGTC-CTGAATCTTCGCCTTGACATTGTCGATCGTGTCAGAGGACTCGAC 168961 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | || |||||||| | || || ||||| || |||||| Sbjct 168962 TTCAAGAGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCATA 169010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059169576800