Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq258 98.7 1e-15 >seq258 Length=65905 Score = 98.7 bits (108), Expect = 1e-15 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 |||||||| ||||| || | |||||||| ||||| | ||| ||||||||||| | || Sbjct 13626 CCCTCATCCCTACTGATCAACTCGTTTGAGAATGTCAGTCCAGGCATCAATCCCCTCTTC 13685 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCA-GCAAA 14011 || ||||| || || |||||||| ||||| |||||||| || || || || ||| ||||| Sbjct 13686 TTCAACCAGAAGATAGCAGCAAAGGACCCAGAAAAGAAAATGCCTTCCAC-GCATGCAAA 13744 Query 14012 CGC 14014 || Sbjct 13745 AGC 13747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479723328648600