Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 >seq6 Length=242052 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || | ||| || ||| ||||||||| |||||||| || | | ||| |||| Sbjct 169308 AAGACGAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCT 169367 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || || ||||| ||| || ||||||| |||||||| || || | || |||||||||| Sbjct 169368 TCAAGTTGCTTTCCGGCGAAAATTAATCGCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 169427 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| ||| ||||| | | ||||| || | ||||| ||| | || |||||| Sbjct 169428 TGAATCTTCGCCTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCAAGAGTGATGGTT 169487 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || || ||||||||||| Sbjct 169488 TTGCCGGTAAGAGTCTTGACGAAAATCTGCAT 169519 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || || ||||||||||| | | || || |||||||| || || | || |||||| Sbjct 169644 TCTTCAAGCTGCTTACCAGCAAAGATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTG 169703 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| || || ||||| | | ||||| |||| ||||||| |||| || || Sbjct 169704 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACTTCGAGAGTGATA 169763 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGT 48731 || ||||||||||| || || || ||||||||||| |||| Sbjct 169764 GTCTTACCGGTGAGGGTCTTGACGAAAATCTGCATGGTGT 169803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247200614779