Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq95 268 2e-66
seq256 86.0 2e-11
>seq95
Length=57217
Score = 268 bits (296), Expect = 2e-66
Identities = 657/993 (66%), Gaps = 6/993 (1%)
Strand=Plus/Plus
Query 363573 CAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGA 363632
|||||| || |||| || |||||||| || |||||||| || |||||||| ||
Sbjct 50541 CAATGCCGGTACTCCCCGGCCCCAGATGTCATCATGCTTTCTCGTAGCCATGAAGGATGA 50600
Query 363633 TTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGG 363692
|||||| || ||||||| || || || |||| |||||||| || ||||||| || ||
Sbjct 50601 TTCCATTGATGGTATCTACGATACTCTCAAGACTTGTGCTCAGATCTCCAAGACCGCTGG 50660
Query 363693 CGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGG 363752
|| |||||| | || |||||| | ||||| || | |||||| ||| ||
Sbjct 50661 TGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGTACCAA 50720
Query 363753 GGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGT 363812
|| ||||| || || | |||| ||||| || | | |||| ||||| | |||||
Sbjct 50721 CGGTTACTCTAACGGTATCATTCCTATGCTCCGAGCTTATGACGCCACTGCTCGATACGT 50780
Query 363813 CGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGC 363872
||||| ||||| ||||| || || || || || ||||| ||||| || ||
Sbjct 50781 TGACCAAGGTGGCAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCCTGGCACGC 50840
Query 363873 CGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACG 363932
||| | ||||| || |||| | |||| ||| || || ||||| | || || ||
Sbjct 50841 TGATGTATTTGATTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACGAGCTCG 50900
Query 363933 TGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA 363992
|||||| ||||| || || ||| | | || | ||| |||||||| || || | | |
Sbjct 50901 TGATCTTTTCTACGCCCTCTGGATCCCCGATCTTTTCATGAAGCGTGTCGAATCCGATGG 50960
Query 363993 GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052
| | ||| | || | || || || ||||| || ||| |||| |||| || || ||
Sbjct 50961 GGACTGGACCCTTATGTGTCCCGCTGAGTGTCCTGGGCTTGCCGACGTATACGGAGAAGA 51020
Query 364053 CTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGC 364112
| || || ||||| | || || | |||| |||| | || || || ||
Sbjct 51021 ATTTGAGAAGCTTTACGAGAGCTACGAGAGGCAGGGTAAGGGGAGAAAAACTATCAAAGC 51080
Query 364113 ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTT 364172
|||||||| ||||| || ||| | || | |||| ||||| || || || || |
Sbjct 51081 CCAGAAGCTTTGGTTCGCTATCCTTGAGGCTCAGACAGAGACTGGTGTCCCTTACATCTG 51140
Query 364173 GTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG 364232
|| || ||| | |||| |||||||||||| ||||||||||||| ||| || ||
Sbjct 51141 TTATAAGGATGCCGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCATTAAGTCCAG 51200
Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292
|| || ||||| || ||||| || || | ||||||| ||| |||||| ||||||||
Sbjct 51201 TAATCTCTGTACTGAAATTATGGAGTATTCTTCTCCCGATGAGGTTGCCGTCTGTAACCT 51260
Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGTAAA---AGATGGT-ACTTTT--GACCACCAGCA 364346
|| || | || ||||| || || || | || || | | | ||| | || |
Sbjct 51261 CGCTTCTCTTGCTCTTCCTGCCTTCGTGGATCTTGAACGTCGCGTCTACGACTTCAAGAA 51320
Query 364347 TCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTA 364406
|| |||| | ||| | || | | || ||||||| || || | || ||
Sbjct 51321 GCTGCATGAGATTACCAAGGTTGTTGCCAAGAACCTCGACACTGTCATTACCCGTAACTA 51380
Query 364407 TTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGT 364466
|||||| | ||||| ||| || || ||||| ||||| || |||| ||||||||
Sbjct 51381 CTATCCAGTGCCTGAGGCCCGCAACTCCAACATGCGCCATCGACCTGTTGGCCTTGGTGT 51440
Query 364467 ACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCG 364526
|| || |||||||||| ||| ||| || ||| | || || || | ||| || |
Sbjct 51441 CCAAGGTCTCGCTGACGCTTTCATGGCCCTTCGCATGCCGTTCGACTCTCTTGAGGCCAG 51500
Query 364527 TGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
| || |||| ||||||| || || || ||
Sbjct 51501 GGAGCTCAATATCCAGATCTTCGAGACCATTTA 51533
>seq256
Length=23044
Score = 86.0 bits (94), Expect = 2e-11
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 371968 CAAAGCTCGTGAATAAACCCCTGTCAATAGATGACTGGTTAAGTAGAACAGAGTCGTCCT 372027
||| | ||| ||| | ||| | ||| || ||||||||||| | | |||||||| ||||
Sbjct 11717 CAACGATCG-GAAAAGACCGCGGTCGATTGATGACTGGTTCATAATTACAGAGTCTTCCT 11775
Query 372028 GATTAAAACCAGAATAACACATGATGGCAACGAT 372061
|||| ||||||||||||||||||||||||| ||
Sbjct 11776 GATTGTAACCAGAATAACACATGATGGCAACAAT 11809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303340591309178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |