Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq156 86.0 6e-12
>seq156
Length=42092
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCA-C 20472
|||||||| || | | || || | ||| || |||||||||||| || || | |
Sbjct 33731 GGGTTCCAAGCCGATAAGATAATCCGTCTGTCAGTCGGATTATTTTTGATGGTGTCGATC 33672
Query 20473 AATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGC 20532
| | | ||||||||| | || | ||| | |||| | | || || || |||| |
Sbjct 33671 ACCCTTTG-CAATTGGTCCACTCCTTTGCCCTTGTAGTTACCGTCGGCATCAGTGTACTC 33613
Query 20533 CGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTG 20592
|| ||||| || ||||||||||| ||||| |||||||||| || || |||||||||||
Sbjct 33612 GGCGCCAAAATGTCTCCACTGGAACCCGTATACAGGTCCCAGGTCACCTTCCCTTCTGTG 33553
Query 20593 CGCCAGGCCGCGCCC--GGCCAGGAACTC 20619
|||| ||| || || ||||||||||
Sbjct 33552 -GCCAAGCC-CGACCTTCTCCAGGAACTC 33526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441368502132360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |