Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq156 86.0 6e-12 >seq156 Length=42092 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCA-C 20472 |||||||| || | | || || | ||| || |||||||||||| || || | | Sbjct 33731 GGGTTCCAAGCCGATAAGATAATCCGTCTGTCAGTCGGATTATTTTTGATGGTGTCGATC 33672 Query 20473 AATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGC 20532 | | | ||||||||| | || | ||| | |||| | | || || || |||| | Sbjct 33671 ACCCTTTG-CAATTGGTCCACTCCTTTGCCCTTGTAGTTACCGTCGGCATCAGTGTACTC 33613 Query 20533 CGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTG 20592 || ||||| || ||||||||||| ||||| |||||||||| || || ||||||||||| Sbjct 33612 GGCGCCAAAATGTCTCCACTGGAACCCGTATACAGGTCCCAGGTCACCTTCCCTTCTGTG 33553 Query 20593 CGCCAGGCCGCGCCC--GGCCAGGAACTC 20619 |||| ||| || || |||||||||| Sbjct 33552 -GCCAAGCC-CGACCTTCTCCAGGAACTC 33526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441368502132360