Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq95 168 8e-37 seq6 116 4e-21 >seq95 Length=57217 Score = 168 bits (186), Expect = 8e-37 Identities = 714/1119 (64%), Gaps = 33/1119 (3%) Strand=Plus/Minus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| ||| |||| |||||||||| || || || || || | | ||| || | Sbjct 51639 CCACATGTCATACTGAAGGATACCTTTAGAAAGGGGAGAGCCTTCGTAAGACTCATAGGT 51580 Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222 |||| |||| || | ||| | ||||| || || ||||| || || ||||| || Sbjct 51579 ACCCTGTTCCTCAGCAAGCTCGCATGAAGCCTCAAGCGCCGCGTGGTAAATGGTCTCGAA 51520 Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 114282 || | ||| | || ||||||| || || |||| | || || || Sbjct 51519 GATCTGGATATTGAGCTCCCTGGCCTCAAGAGAGTCGAACGGCATGCGAAGGGCCATGAA 51460 Query 114283 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 114342 | || ||||||||||||||||| ||||||| || ||||| | ||| || || || || Sbjct 51459 AGCGTCAGCGAGACCTTGGACACCAAGGCCAACAGGTCGATGGCGCATGTTGGAGTTGCG 51400 Query 114343 AGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399 || ||| ||| ||||| | || | || || | | || || |||| || Sbjct 51399 ---GGCCTCAGGCACTGGATAGTAGTTACGGGTAATGACAGTGTCGAGGTTCTTGGCAAC 51343 Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 114459 |||||| || || ||||| ||||| | | | || | |||| || || || | Sbjct 51342 AACCTTGGTAATCTCATGCAGCTTCTTGAAGTCGTAGACGCGACGTTCAAGATCCACGAA 51283 Query 114460 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 114519 |||||| || | || || || ||||| || | |||||| | || ||||| Sbjct 51282 GGCAGGAAGAGCAAGAGAAGCGAGGTTACAGACGGCAACCTCATCGGGAGAAGAATACTC 51223 Query 114520 TATAATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577 |||||||| ||||| | ||| || | ||||||||| || | || |||||| || ||| Sbjct 51222 CATAATTTCAGTACAGAGATTACTGGA--CTTAATGGTACCAAGGTGCTTTTGGTTGGAC 51165 Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637 || | ||| |||||||| ||| ||||| || || ||||| || || | || Sbjct 51164 TTGGAGTTGGCGGCATCCTTATAACAGATGTAAGGGACACCAGTCTCTGTCTGAGCCTCA 51105 Query 114638 AGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC----CCCTCCT 114692 || ||||| ||| | | || | |||| | ||| || ||| | |||| | Sbjct 51104 AGGATAGCGAACCAAAGCTTCTG-GGCTTTGATAGT----TTTTCTCCCCTTACCCTGCC 51050 Query 114693 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 114752 |||||| | ||| || ||||| ||||| || | || | ||||| || Sbjct 51049 TCTCGTAGCTCTCGTAAAGCTTCTCAAATTCTTCTCCGTATACGTCGGCAAGCCCAGGAC 50990 Query 114753 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGT 114812 || | | || || | || | ||| | ||| | || |||||||||||||| || | Sbjct 50989 ACTCAGCGGGACACATAAGGGTCCAGTCCCCATCGGATTCGACACGCTTCATGAAAAGAT 50930 Query 114813 CTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 114872 | ||||||||||| || |||| ||||| ||| || | || || | || || || Sbjct 50929 CGGGGATCCAGAGGGCGTAGAAAAGATCACGAGCTCGTACCTCCTCCTTACCATGGTTCT 50870 Query 114873 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 114932 | || || | || || | | ||| |||||||| || || || || | |||| | Sbjct 50869 TCCTTAAGTCAATGAAATCAAATACATCAGCGTGCCAGGGCTCAAGATAGATGGCGAAGG 50810 Query 114933 ACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGC 114986 || | |||| ||| | |||| || || | || ||||| | | | | | Sbjct 50809 CACC---AGGACGCTTGTTGCCACCTTGGTCAACGTATCGAGCAGTGGCGTCATAAGCTC 50753 Query 114987 GAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATT 115044 | ||||| ||||||||||| | ||| | || || || || || || ||| | || Sbjct 50752 GGAGCATAGGAATGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTAGGAGCC--CTT 50695 Query 115045 GGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 115104 || | || || || ||||| | ||||||||| || || ||| ||||| || || || Sbjct 50694 CGCACGGATATTGTGAATGTGAAGACCAATACCACCAGCGGTCTTGGAGATCTGAGCACA 50635 Query 115105 CTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCA 115164 | ||||| | ||||||| || || || || ||| |||| | || | || ||||| Sbjct 50634 AGTCTTGAGAGTATCGTAGATACCATCAATGGAATCATCCTTCATGGCTACGAGAAAGCA 50575 Query 115165 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203 ||||| || |||| || ||||| || ||||| || Sbjct 50574 TGATGACATCTGGGGCCGGGGAGTACCGGCATTGAAAAG 50536 >seq6 Length=242052 Score = 116 bits (128), Expect = 4e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||||||||||||||| |||||||| || || |||||| || || Sbjct 183841 GGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTGAGACC 183782 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 183781 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCAGAGAAGAAGAT 183722 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCA 126199 || || || ||||| || | ||| |||||| Sbjct 183721 ACCTTCGACGGCAGCGAAAGCGATGAGTCGCTCA 183688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347783269320