Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq95 168 8e-37
seq6 116 4e-21
>seq95
Length=57217
Score = 168 bits (186), Expect = 8e-37
Identities = 714/1119 (64%), Gaps = 33/1119 (3%)
Strand=Plus/Minus
Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162
|||||| ||| |||| |||||||||| || || || || || | | ||| || |
Sbjct 51639 CCACATGTCATACTGAAGGATACCTTTAGAAAGGGGAGAGCCTTCGTAAGACTCATAGGT 51580
Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222
|||| |||| || | ||| | ||||| || || ||||| || || ||||| ||
Sbjct 51579 ACCCTGTTCCTCAGCAAGCTCGCATGAAGCCTCAAGCGCCGCGTGGTAAATGGTCTCGAA 51520
Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAA 114282
|| | ||| | || ||||||| || || |||| | || || ||
Sbjct 51519 GATCTGGATATTGAGCTCCCTGGCCTCAAGAGAGTCGAACGGCATGCGAAGGGCCATGAA 51460
Query 114283 TACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCG 114342
| || ||||||||||||||||| ||||||| || ||||| | ||| || || || ||
Sbjct 51459 AGCGTCAGCGAGACCTTGGACACCAAGGCCAACAGGTCGATGGCGCATGTTGGAGTTGCG 51400
Query 114343 AGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGAC 114399
|| ||| ||| ||||| | || | || || | | || || |||| ||
Sbjct 51399 ---GGCCTCAGGCACTGGATAGTAGTTACGGGTAATGACAGTGTCGAGGTTCTTGGCAAC 51343
Query 114400 AACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATA 114459
|||||| || || ||||| ||||| | | | || | |||| || || || |
Sbjct 51342 AACCTTGGTAATCTCATGCAGCTTCTTGAAGTCGTAGACGCGACGTTCAAGATCCACGAA 51283
Query 114460 CTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTC 114519
|||||| || | || || || ||||| || | |||||| | || |||||
Sbjct 51282 GGCAGGAAGAGCAAGAGAAGCGAGGTTACAGACGGCAACCTCATCGGGAGAAGAATACTC 51223
Query 114520 TATAATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577
|||||||| ||||| | ||| || | ||||||||| || | || |||||| || |||
Sbjct 51222 CATAATTTCAGTACAGAGATTACTGGA--CTTAATGGTACCAAGGTGCTTTTGGTTGGAC 51165
Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637
|| | ||| |||||||| ||| ||||| || || ||||| || || | ||
Sbjct 51164 TTGGAGTTGGCGGCATCCTTATAACAGATGTAAGGGACACCAGTCTCTGTCTGAGCCTCA 51105
Query 114638 AGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC----CCCTCCT 114692
|| ||||| ||| | | || | |||| | ||| || ||| | |||| |
Sbjct 51104 AGGATAGCGAACCAAAGCTTCTG-GGCTTTGATAGT----TTTTCTCCCCTTACCCTGCC 51050
Query 114693 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 114752
|||||| | ||| || ||||| ||||| || | || | ||||| ||
Sbjct 51049 TCTCGTAGCTCTCGTAAAGCTTCTCAAATTCTTCTCCGTATACGTCGGCAAGCCCAGGAC 50990
Query 114753 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGT 114812
|| | | || || | || | ||| | ||| | || |||||||||||||| || |
Sbjct 50989 ACTCAGCGGGACACATAAGGGTCCAGTCCCCATCGGATTCGACACGCTTCATGAAAAGAT 50930
Query 114813 CTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 114872
| ||||||||||| || |||| ||||| ||| || | || || | || || ||
Sbjct 50929 CGGGGATCCAGAGGGCGTAGAAAAGATCACGAGCTCGTACCTCCTCCTTACCATGGTTCT 50870
Query 114873 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 114932
| || || | || || | | ||| |||||||| || || || || | |||| |
Sbjct 50869 TCCTTAAGTCAATGAAATCAAATACATCAGCGTGCCAGGGCTCAAGATAGATGGCGAAGG 50810
Query 114933 ACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGC 114986
|| | |||| ||| | |||| || || | || ||||| | | | | |
Sbjct 50809 CACC---AGGACGCTTGTTGCCACCTTGGTCAACGTATCGAGCAGTGGCGTCATAAGCTC 50753
Query 114987 GAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATT 115044
| ||||| ||||||||||| | ||| | || || || || || || ||| | ||
Sbjct 50752 GGAGCATAGGAATGATACCGTTAGAGTAACCGTTGGTACCGGCAATGTAGGAGCC--CTT 50695
Query 115045 GGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 115104
|| | || || || ||||| | ||||||||| || || ||| ||||| || || ||
Sbjct 50694 CGCACGGATATTGTGAATGTGAAGACCAATACCACCAGCGGTCTTGGAGATCTGAGCACA 50635
Query 115105 CTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCA 115164
| ||||| | ||||||| || || || || ||| |||| | || | || |||||
Sbjct 50634 AGTCTTGAGAGTATCGTAGATACCATCAATGGAATCATCCTTCATGGCTACGAGAAAGCA 50575
Query 115165 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203
||||| || |||| || ||||| || ||||| ||
Sbjct 50574 TGATGACATCTGGGGCCGGGGAGTACCGGCATTGAAAAG 50536
>seq6
Length=242052
Score = 116 bits (128), Expect = 4e-21
Identities = 118/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || |||||||||||||||||| |||||||| || || |||||| || ||
Sbjct 183841 GGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAGGTGAGACC 183782
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | || ||||| |||||||||||
Sbjct 183781 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCAGAGAAGAAGAT 183722
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCA 126199
|| || || ||||| || | ||| ||||||
Sbjct 183721 ACCTTCGACGGCAGCGAAAGCGATGAGTCGCTCA 183688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597347783269320
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