Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq95 185 9e-42 >seq95 Length=57217 Score = 185 bits (204), Expect = 9e-42 Identities = 476/725 (66%), Gaps = 0/725 (0%) Strand=Plus/Plus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || ||||| || || || || ||| |||||||| || || || || | | | ||| Sbjct 50536 CTTTTCAATGCCGGTACTCCCCGGCCCCAGATGTCATCATGCTTTCTCGTAGCCATGAAG 50595 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | || ||||| || || | ||| | |||||| ||||| ||||| || | Sbjct 50596 GATGATTCCATTGATGGTATCTACGATACTCTCAAGACTTGTGCTCAGATCTCCAAGACC 50655 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || || || | | ||| | | ||||| | ||| |||||||| |||| Sbjct 50656 GCTGGTGGTATTGGTCTTCACATTCACAATATCCGTGCGAAGGGCTCCTACATTGCCGGT 50715 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| || ||| ||||| || | ||||||||||| | | || | | || || Sbjct 50716 ACCAACGGTTACTCTAACGGTATCATTCCTATGCTCCGAGCTTATGACGCCACTGCTCGA 50775 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 ||||| ||||| ||||| | | | ||| | ||||| ||||||| ||||||||| Sbjct 50776 TACGTTGACCAAGGTGGCAACAAGCGTCCTGGTGCCTTCGCCATCTATCTTGAGCCCTGG 50835 Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263 ||||| || || | |||||| ||| | | |||||||| || || || || | Sbjct 50836 CACGCTGATGTATTTGATTTCATTGACTTAAGGAAGAACCATGGTAAGGAGGAGGTACGA 50895 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || | || || |||||||| |||||| | || || ||||| ||||| || ||||| Sbjct 50896 GCTCGTGATCTTTTCTACGCCCTCTGGATCCCCGATCTTTTCATGAAGCGTGTCGAATCC 50955 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383 | | ||||| ||| | |||||| ||| ||||| || || ||||||| | ||| Sbjct 50956 GATGGGGACTGGACCCTTATGTGTCCCGCTGAGTGTCCTGGGCTTGCCGACGTATACGGA 51015 Query 94384 TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATG 94443 ||||| | | || | | ||||| |||||| |||| || || ||| Sbjct 51016 GAAGAATTTGAGAAGCTTTACGAGAGCTACGAGAGGCAGGGTAAGGGGAGAAAAACTATC 51075 Query 94444 GATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTAC 94503 | || |||||| ||| ||| | || | ||| ||||| ||| || ||| Sbjct 51076 AAAGCCCAGAAGCTTTGGTTCGCTATCCTTGAGGCTCAGACAGAGACTGGTGTCCCTTAC 51135 Query 94504 ATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAG 94563 |||| | ||||| | | |||| ||||||||||||| ||||||| || || ||| Sbjct 51136 ATCTGTTATAAGGATGCCGCCAACTCCAAGTCCAACCAAAAGCACCTTGGTACCATTAAG 51195 Query 94564 AGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGT 94623 | ||||| || || || ||| | |||||| ||||||| || ||| |||| || ||| Sbjct 51196 TCCAGTAATCTCTGTACTGAAATTATGGAGTATTCTTCTCCCGATGAGGTTGCCGTCTGT 51255 Query 94624 AACCT 94628 ||||| Sbjct 51256 AACCT 51260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718382632840