Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq6 96.9 2e-15
>seq6
Length=242052
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||| | | || || | ||| ||||| || || ||||| |||||||| |||
Sbjct 169293 CCACCTCGGAGACGCAAGACGAGATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 169352
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| ||| ||||||| | ||| || || ||| | || || ||||| ||||| |||
Sbjct 169353 AGAGTTCGGCCGTCTTCAAGTTGCTTTCCGGCGAAAATTAATCGCTGCTGGTCAGGAGGA 169412
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||||||||| ||| || || ||| | || || || || || ||
Sbjct 169413 ATACCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCGATGGTGTCAGAGGACTCAACC 169472
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || |||||||| || || ||||| || || ||||| ||||||
Sbjct 169473 TCAAGAGTGATGGTTTTGCCGGTAAGAGTCTTGACGAAAATCTGCATA 169520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357388606898015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |