Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014-
10-24] 779 sequences; 17,256,624 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq163 104 2e-16
seq21 89.7 4e-12
>seq163
Length=95501
Score = 104 bits (114), Expect = 2e-16
Identities = 78/92 (85%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 668846 AGATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATG 668905
|| |||| ||| |||||||||||||| ||||| |||||||||||||| ||||||||| |
Sbjct 87075 AGGTTAAAAGGAAAAGAAGGTCGTATGAGAGGTAATTTGATGGGAAAGCGTGTCGATTTT 87134
Query 668906 TCTGCACGTACAGTTATTACTTCTGATCCCAA 668937
|| || || || ||||||||| |||||||||
Sbjct 87135 TCAGCGCGAACGGTTATTACTGGTGATCCCAA 87166
>seq21
Length=50189
Score = 89.7 bits (98), Expect = 4e-12
Identities = 138/193 (72%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 635438 AAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTT 635497
|| || || || ||| |||| || |||||||| || ||| | ||||| | || || |||
Sbjct 6648 AACTGCACTCTCATTCTGACGGAAGGAGATTCTGCCAAAGCTCTCGCTGTTTCCGGCCTT 6707
Query 635498 AATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTT 635557
||| | ||| | ||| | ||||| |||||||| || ||||| |||||| | || |||
Sbjct 6708 GCAGTTGTCGGACGCGATGAATATGGCGTTTTCCCTCTCAGAGGTAAACTTCTCAACGTT 6767
Query 635558 AGGGATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCA-ATCaaaaaaaT 635616
| || ||| ||| | | |||| | |||||||||| | ||||| ||||| | ||
Sbjct 6768 CGCGAAGCTGGTCACGACCAGATTGTAAAAAATGAGGAAA-TCCAGCATATCAAGCAGAT 6826
Query 635617 TGTTGGACTTGAA 635629
| |||| |||||
Sbjct 6827 T-TTGGGTTTGAA 6838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780783743453974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |